Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB13Q9Y5F0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHB13Q9Y5F0 AC092028.1-203ENST00000608262 953 ntBASIC25.23■■□□□ 1.63
PCDHB13Q9Y5F0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.23■■□□□ 1.63
PCDHB13Q9Y5F0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHB13Q9Y5F0 ABCB10P4-201ENST00000566803 2184 ntBASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHB13Q9Y5F0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDHB13Q9Y5F0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.2■■□□□ 1.63
PCDHB13Q9Y5F0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.2■■□□□ 1.63
PCDHB13Q9Y5F0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDHB13Q9Y5F0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PCDHB13Q9Y5F0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHB13Q9Y5F0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHB13Q9Y5F0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHB13Q9Y5F0 ALDH1A3-203ENST00000557963 1670 ntBASIC25.19■■□□□ 1.62
PCDHB13Q9Y5F0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHB13Q9Y5F0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHB13Q9Y5F0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 MIR6722-201ENST00000617286 78 ntBASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHB13Q9Y5F0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHB13Q9Y5F0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHB13Q9Y5F0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHB13Q9Y5F0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms