Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM17Q9Y577 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 AC009086.3-201ENST00000623486 1008 ntBASIC26.25■■□□□ 1.79
TRIM17Q9Y577 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM17Q9Y577 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TRIM17Q9Y577 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM17Q9Y577 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM17Q9Y577 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM17Q9Y577 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM17Q9Y577 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM17Q9Y577 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM17Q9Y577 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM17Q9Y577 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM17Q9Y577 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM17Q9Y577 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM17Q9Y577 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM17Q9Y577 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.2■■□□□ 1.79
TRIM17Q9Y577 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM17Q9Y577 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
TRIM17Q9Y577 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.2■■□□□ 1.79
TRIM17Q9Y577 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM17Q9Y577 KRT18P14-201ENST00000534205 1250 ntBASIC26.2■■□□□ 1.78
TRIM17Q9Y577 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.2■■□□□ 1.78
TRIM17Q9Y577 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.2■■□□□ 1.78
TRIM17Q9Y577 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TRIM17Q9Y577 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TRIM17Q9Y577 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.19■■□□□ 1.78
TRIM17Q9Y577 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.19■■□□□ 1.78
TRIM17Q9Y577 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.19■■□□□ 1.78
TRIM17Q9Y577 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM17Q9Y577 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
TRIM17Q9Y577 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM17Q9Y577 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 AC012414.1-201ENST00000556676 535 ntBASIC26.18■■□□□ 1.78
TRIM17Q9Y577 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM17Q9Y577 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.17■■□□□ 1.78
TRIM17Q9Y577 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM17Q9Y577 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM17Q9Y577 AC080038.1-201ENST00000611274 1154 ntBASIC26.17■■□□□ 1.78
TRIM17Q9Y577 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM17Q9Y577 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM17Q9Y577 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 AC131274.2-201ENST00000580697 1507 ntBASIC26.15■■□□□ 1.78
TRIM17Q9Y577 MIR572-201ENST00000384983 95 ntBASIC26.15■■□□□ 1.78
TRIM17Q9Y577 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 AL354811.1-201ENST00000610286 706 ntBASIC26.15■■□□□ 1.78
TRIM17Q9Y577 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM17Q9Y577 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM17Q9Y577 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM17Q9Y577 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.14■■□□□ 1.78
TRIM17Q9Y577 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM17Q9Y577 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.14■■□□□ 1.78
TRIM17Q9Y577 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM17Q9Y577 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM17Q9Y577 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM17Q9Y577 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 TMEM191A-211ENST00000637163 1067 ntBASIC26.13■■□□□ 1.77
TRIM17Q9Y577 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM17Q9Y577 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms