Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NOTCH3Q9UM47 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
NOTCH3Q9UM47 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.52■□□□□ 0.4
NOTCH3Q9UM47 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.52■□□□□ 0.4
NOTCH3Q9UM47 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NOTCH3Q9UM47 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NOTCH3Q9UM47 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NOTCH3Q9UM47 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 AC004448.1-201ENST00000458332 883 ntBASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 AC009102.2-201ENST00000606772 1639 ntBASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.5■□□□□ 0.39
NOTCH3Q9UM47 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 SLC6A10P-202ENST00000431994 2058 ntBASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NOTCH3Q9UM47 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 MIR4767-201ENST00000582827 78 ntBASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 AL138724.1-201ENST00000606771 1088 ntBASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 CA15P2-201ENST00000611168 834 ntBASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 AC011298.3-201ENST00000615796 283 ntBASIC17.48■□□□□ 0.39
NOTCH3Q9UM47 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 AC008764.7-201ENST00000593779 1081 ntBASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.47■□□□□ 0.39
NOTCH3Q9UM47 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 AC010501.1-201ENST00000606270 1962 ntBASIC17.46■□□□□ 0.39
NOTCH3Q9UM47 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NOTCH3Q9UM47 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
NOTCH3Q9UM47 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.45■□□□□ 0.38
NOTCH3Q9UM47 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms