Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 AC021242.3-201ENST00000607598 1377 ntBASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NECTIN3Q9NQS3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 CLDN5-201ENST00000403084 2357 ntBASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 KRT125P-201ENST00000546827 989 ntBASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NECTIN3Q9NQS3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 MIR4787-201ENST00000607364 84 ntBASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NECTIN3Q9NQS3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NECTIN3Q9NQS3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 GUSBP5-201ENST00000418136 578 ntBASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.78■■□□□ 1.08
NECTIN3Q9NQS3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 AP003733.4-201ENST00000623785 1697 ntBASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NECTIN3Q9NQS3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NECTIN3Q9NQS3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.77■■□□□ 1.07
NECTIN3Q9NQS3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NECTIN3Q9NQS3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 HLA-L-211ENST00000482052 1765 ntBASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NECTIN3Q9NQS3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NECTIN3Q9NQS3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
NECTIN3Q9NQS3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms