Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD248Q9HCU0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CD248Q9HCU0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD248Q9HCU0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.85■■□□□ 1.41
CD248Q9HCU0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.85■■□□□ 1.41
CD248Q9HCU0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.85■■□□□ 1.41
CD248Q9HCU0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.85■■□□□ 1.41
CD248Q9HCU0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
CD248Q9HCU0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CD248Q9HCU0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD248Q9HCU0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD248Q9HCU0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD248Q9HCU0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.84■■□□□ 1.41
CD248Q9HCU0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.84■■□□□ 1.41
CD248Q9HCU0 AL117332.1-201ENST00000622628 974 ntBASIC23.84■■□□□ 1.41
CD248Q9HCU0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD248Q9HCU0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.84■■□□□ 1.41
CD248Q9HCU0 AC142381.3-201ENST00000568208 1670 ntBASIC23.83■■□□□ 1.41
CD248Q9HCU0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CD248Q9HCU0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CD248Q9HCU0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.83■■□□□ 1.41
CD248Q9HCU0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.83■■□□□ 1.41
CD248Q9HCU0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.83■■□□□ 1.41
CD248Q9HCU0 MIR3621-201ENST00000580529 85 ntBASIC23.83■■□□□ 1.41
CD248Q9HCU0 AC010997.5-201ENST00000609182 354 ntBASIC23.83■■□□□ 1.41
CD248Q9HCU0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CD248Q9HCU0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.83■■□□□ 1.4
CD248Q9HCU0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CD248Q9HCU0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.83■■□□□ 1.4
CD248Q9HCU0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CD248Q9HCU0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD248Q9HCU0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD248Q9HCU0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD248Q9HCU0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.82■■□□□ 1.4
CD248Q9HCU0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD248Q9HCU0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CD248Q9HCU0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CD248Q9HCU0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CD248Q9HCU0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CD248Q9HCU0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.81■■□□□ 1.4
CD248Q9HCU0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD248Q9HCU0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD248Q9HCU0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CD248Q9HCU0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.81■■□□□ 1.4
CD248Q9HCU0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CD248Q9HCU0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CD248Q9HCU0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD248Q9HCU0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD248Q9HCU0 FOXO3B-201ENST00000395675 1928 ntBASIC23.8■■□□□ 1.4
CD248Q9HCU0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD248Q9HCU0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.8■■□□□ 1.4
CD248Q9HCU0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.8■■□□□ 1.4
CD248Q9HCU0 MIR6724-1-201ENST00000616420 92 ntBASIC23.8■■□□□ 1.4
CD248Q9HCU0 MIR6724-2-201ENST00000616483 92 ntBASIC23.8■■□□□ 1.4
CD248Q9HCU0 MIR6724-4-201ENST00000617390 92 ntBASIC23.8■■□□□ 1.4
CD248Q9HCU0 MIR6724-3-201ENST00000622482 92 ntBASIC23.8■■□□□ 1.4
CD248Q9HCU0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD248Q9HCU0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CD248Q9HCU0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.8■■□□□ 1.4
CD248Q9HCU0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD248Q9HCU0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD248Q9HCU0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD248Q9HCU0 MIR638-201ENST00000385237 100 ntBASIC23.79■■□□□ 1.4
CD248Q9HCU0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.79■■□□□ 1.4
CD248Q9HCU0 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.79■■□□□ 1.4
CD248Q9HCU0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.79■■□□□ 1.4
CD248Q9HCU0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD248Q9HCU0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD248Q9HCU0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD248Q9HCU0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.78■■□□□ 1.4
CD248Q9HCU0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.78■■□□□ 1.4
CD248Q9HCU0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.78■■□□□ 1.4
CD248Q9HCU0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD248Q9HCU0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD248Q9HCU0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD248Q9HCU0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.77■■□□□ 1.4
CD248Q9HCU0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CD248Q9HCU0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD248Q9HCU0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.77■■□□□ 1.4
CD248Q9HCU0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD248Q9HCU0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CD248Q9HCU0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD248Q9HCU0 AC096887.2-201ENST00000623443 1957 ntBASIC23.76■■□□□ 1.39
CD248Q9HCU0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CD248Q9HCU0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CD248Q9HCU0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD248Q9HCU0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.76■■□□□ 1.39
CD248Q9HCU0 MTDHP2-201ENST00000601468 714 ntBASIC23.76■■□□□ 1.39
CD248Q9HCU0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD248Q9HCU0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD248Q9HCU0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms