Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AL161729.1-201ENST00000604104 1402 ntBASIC25.5■■□□□ 1.67
ATP6V0A4Q9HBG4 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.5■■□□□ 1.67
ATP6V0A4Q9HBG4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 MIR638-201ENST00000385237 100 ntBASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.49■■□□□ 1.67
ATP6V0A4Q9HBG4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP6V0A4Q9HBG4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.47■■□□□ 1.67
ATP6V0A4Q9HBG4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.46■■□□□ 1.67
ATP6V0A4Q9HBG4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ATP6V0A4Q9HBG4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.46■■□□□ 1.67
ATP6V0A4Q9HBG4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ATP6V0A4Q9HBG4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.46■■□□□ 1.67
ATP6V0A4Q9HBG4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ATP6V0A4Q9HBG4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
ATP6V0A4Q9HBG4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
ATP6V0A4Q9HBG4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.45■■□□□ 1.67
ATP6V0A4Q9HBG4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
ATP6V0A4Q9HBG4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.45■■□□□ 1.66
ATP6V0A4Q9HBG4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
ATP6V0A4Q9HBG4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A4Q9HBG4 MIR935-201ENST00000401179 91 ntBASIC25.44■■□□□ 1.66
ATP6V0A4Q9HBG4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A4Q9HBG4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATP6V0A4Q9HBG4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
ATP6V0A4Q9HBG4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATP6V0A4Q9HBG4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 MIR4466-201ENST00000606121 54 ntBASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATP6V0A4Q9HBG4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP6V0A4Q9HBG4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATP6V0A4Q9HBG4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.41■■□□□ 1.66
ATP6V0A4Q9HBG4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATP6V0A4Q9HBG4 AC005703.6-201ENST00000623265 1329 ntBASIC25.4■■□□□ 1.66
ATP6V0A4Q9HBG4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.4■■□□□ 1.66
ATP6V0A4Q9HBG4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.4■■□□□ 1.66
ATP6V0A4Q9HBG4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.4■■□□□ 1.66
ATP6V0A4Q9HBG4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ATP6V0A4Q9HBG4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ATP6V0A4Q9HBG4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms