Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RC3H2Q9HBD1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.72■■□□□ 1.55
RC3H2Q9HBD1 AC008764.7-201ENST00000593779 1081 ntBASIC24.72■■□□□ 1.55
RC3H2Q9HBD1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RC3H2Q9HBD1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
RC3H2Q9HBD1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RC3H2Q9HBD1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.71■■□□□ 1.55
RC3H2Q9HBD1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.71■■□□□ 1.55
RC3H2Q9HBD1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
RC3H2Q9HBD1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RC3H2Q9HBD1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 AC006455.2-201ENST00000429931 906 ntBASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.69■■□□□ 1.54
RC3H2Q9HBD1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 AC241377.3-202ENST00000626088 1088 ntBASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 AC241585.3-202ENST00000628937 1088 ntBASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 AC245100.8-202ENST00000629247 1058 ntBASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RC3H2Q9HBD1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 AL022069.1-201ENST00000568025 1636 ntBASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H2Q9HBD1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H2Q9HBD1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H2Q9HBD1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.66■■□□□ 1.54
RC3H2Q9HBD1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RC3H2Q9HBD1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.64■■□□□ 1.54
RC3H2Q9HBD1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RC3H2Q9HBD1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.64■■□□□ 1.54
RC3H2Q9HBD1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.64■■□□□ 1.54
RC3H2Q9HBD1 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.64■■□□□ 1.54
RC3H2Q9HBD1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
RC3H2Q9HBD1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
RC3H2Q9HBD1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RC3H2Q9HBD1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H2Q9HBD1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H2Q9HBD1 AC233992.3-201ENST00000607491 485 ntBASIC24.63■■□□□ 1.53
RC3H2Q9HBD1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H2Q9HBD1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H2Q9HBD1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H2Q9HBD1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H2Q9HBD1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H2Q9HBD1 BX842568.3-201ENST00000418104 571 ntBASIC24.62■■□□□ 1.53
RC3H2Q9HBD1 MIR3181-201ENST00000578512 73 ntBASIC24.62■■□□□ 1.53
RC3H2Q9HBD1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.61■■□□□ 1.53
RC3H2Q9HBD1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RC3H2Q9HBD1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.6■■□□□ 1.53
RC3H2Q9HBD1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.6■■□□□ 1.53
RC3H2Q9HBD1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
RC3H2Q9HBD1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RC3H2Q9HBD1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms