Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 AC022211.4-201ENST00000625094 2161 ntBASIC21.28■■□□□ 1
CDCP1Q9H5V8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCP1Q9H5V8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDCP1Q9H5V8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP1Q9H5V8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP1Q9H5V8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCP1Q9H5V8 AL136116.3-201ENST00000402907 1138 ntBASIC21.27■■□□□ 1
CDCP1Q9H5V8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDCP1Q9H5V8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.27■■□□□ 1
CDCP1Q9H5V8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.27■■□□□ 1
CDCP1Q9H5V8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDCP1Q9H5V8 AL022069.1-201ENST00000568025 1636 ntBASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDCP1Q9H5V8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 HLA-L-211ENST00000482052 1765 ntBASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDCP1Q9H5V8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 MIR4466-201ENST00000606121 54 ntBASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCP1Q9H5V8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDCP1Q9H5V8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 AL512631.2-201ENST00000604634 923 ntBASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 AC005703.6-201ENST00000623265 1329 ntBASIC21.22■□□□□ 0.99
CDCP1Q9H5V8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDCP1Q9H5V8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.21■□□□□ 0.99
CDCP1Q9H5V8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDCP1Q9H5V8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDCP1Q9H5V8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDCP1Q9H5V8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.21■□□□□ 0.99
CDCP1Q9H5V8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms