Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YNL247WYNL247W 2304 nt4.01□□□□□ -1.77
ATG40Q99325 MNT2YGL257C 1677 nt4.01□□□□□ -1.77
ATG40Q99325 ARO2YGL148W 1131 nt4.01□□□□□ -1.77
ATG40Q99325 PDE1YGL248W 1110 nt4.01□□□□□ -1.77
ATG40Q99325 PCT1YGR202C 1275 nt4.01□□□□□ -1.77
ATG40Q99325 YJU2YKL095W 837 nt4.01□□□□□ -1.77
ATG40Q99325 PEX22YAL055W 543 nt4.01□□□□□ -1.77
ATG40Q99325 YLR283WYLR283W 945 nt4.01□□□□□ -1.77
ATG40Q99325 MAK3YPR051W 531 nt4.01□□□□□ -1.77
ATG40Q99325 HSP26YBR072W 645 nt4.01□□□□□ -1.77
ATG40Q99325 RVB1YDR190C 1392 nt4.01□□□□□ -1.77
ATG40Q99325 RAD30YDR419W 1899 nt4.01□□□□□ -1.77
ATG40Q99325 PEX29YDR479C 1665 nt4□□□□□ -1.77
ATG40Q99325 KCH1YJR054W 1494 nt4□□□□□ -1.77
ATG40Q99325 RPL34AYER056C-A 366 nt4□□□□□ -1.77
ATG40Q99325 SUT1YGL162W 900 nt4□□□□□ -1.77
ATG40Q99325 JJJ3YJR097W 519 nt4□□□□□ -1.77
ATG40Q99325 YKL107WYKL107W 930 nt4□□□□□ -1.77
ATG40Q99325 YML131WYML131W 1098 nt4□□□□□ -1.77
ATG40Q99325 GRE1YPL223C 507 nt4□□□□□ -1.77
ATG40Q99325 SSO1YPL232W 873 nt4□□□□□ -1.77
ATG40Q99325 YPR109WYPR109W 885 nt4□□□□□ -1.77
ATG40Q99325 YCL021W-AYCL021W-A 378 nt4□□□□□ -1.77
ATG40Q99325 YAP1802YGR241C 1707 nt4□□□□□ -1.77
ATG40Q99325 RRB1YMR131C 1536 nt4□□□□□ -1.77
ATG40Q99325 ECM7YLR443W 1347 nt3.99□□□□□ -1.77
ATG40Q99325 MPS3YJL019W 2049 nt3.99□□□□□ -1.77
ATG40Q99325 URA3YEL021W 804 nt3.99□□□□□ -1.77
ATG40Q99325 RMR1YGL250W 726 nt3.99□□□□□ -1.77
ATG40Q99325 AIM17YHL021C 1398 nt3.99□□□□□ -1.77
ATG40Q99325 SPC97YHR172W 2472 nt3.99□□□□□ -1.77
ATG40Q99325 YPL245WYPL245W 1365 nt3.99□□□□□ -1.77
ATG40Q99325 NUP116YMR047C 3342 nt3.98□□□□□ -1.77
ATG40Q99325 PXA1YPL147W 2613 nt3.98□□□□□ -1.77
ATG40Q99325 BUD7YOR299W 2241 nt3.98□□□□□ -1.77
ATG40Q99325 MSC7YHR039C 1935 nt3.98□□□□□ -1.77
ATG40Q99325 SCS2YER120W 735 nt3.98□□□□□ -1.77
ATG40Q99325 VPS29YHR012W 849 nt3.98□□□□□ -1.77
ATG40Q99325 SEC13YLR208W 894 nt3.98□□□□□ -1.77
ATG40Q99325 SUP35YDR172W 2058 nt3.98□□□□□ -1.77
ATG40Q99325 SYP1YCR030C 2613 nt3.97□□□□□ -1.77
ATG40Q99325 MKC7YDR144C 1791 nt3.97□□□□□ -1.77
ATG40Q99325 REV7YIL139C 738 nt3.97□□□□□ -1.77
ATG40Q99325 YAR019W-AYAR019W-A 333 nt3.97□□□□□ -1.77
ATG40Q99325 YBL006W-AYBL006W-A 150 nt3.97□□□□□ -1.77
ATG40Q99325 AIF1YNR074C 1137 nt3.97□□□□□ -1.77
ATG40Q99325 FAA3YIL009W 2085 nt3.97□□□□□ -1.77
ATG40Q99325 SKG3YLR187W 3081 nt3.97□□□□□ -1.77
ATG40Q99325 MOT2YER068W 1764 nt3.97□□□□□ -1.77
ATG40Q99325 HOT1YMR172W 2160 nt3.96□□□□□ -1.78
ATG40Q99325 GPP1YIL053W 753 nt3.96□□□□□ -1.78
ATG40Q99325 LDB18YLL049W 540 nt3.96□□□□□ -1.78
ATG40Q99325 PEX32YBR168W 1242 nt3.96□□□□□ -1.78
ATG40Q99325 TUB3YML124C 1338 nt3.95□□□□□ -1.78
ATG40Q99325 GMC1YDR506C 1827 nt3.95□□□□□ -1.78
ATG40Q99325 TAF5YBR198C 2397 nt3.95□□□□□ -1.78
ATG40Q99325 APC4YDR118W 1959 nt3.95□□□□□ -1.78
ATG40Q99325 YHL049CYHL049C 816 nt3.95□□□□□ -1.78
ATG40Q99325 YIR017W-AYIR017W-A 600 nt3.95□□□□□ -1.78
ATG40Q99325 NUP1YOR098C 3231 nt3.95□□□□□ -1.78
ATG40Q99325 SDA1YGR245C 2304 nt3.95□□□□□ -1.78
ATG40Q99325 MDR1YGR100W 2853 nt3.94□□□□□ -1.78
ATG40Q99325 NOP8YOL144W 1455 nt3.94□□□□□ -1.78
ATG40Q99325 SSB2YNL209W 1842 nt3.94□□□□□ -1.78
ATG40Q99325 HNT2YDR305C 654 nt3.94□□□□□ -1.78
ATG40Q99325 FUM1YPL262W 1467 nt3.93□□□□□ -1.78
ATG40Q99325 TYW3YGL050W 822 nt3.93□□□□□ -1.78
ATG40Q99325 CAB4YGR277C 918 nt3.93□□□□□ -1.78
ATG40Q99325 MNN11YJL183W 1269 nt3.93□□□□□ -1.78
ATG40Q99325 YMR135W-AYMR135W-A 534 nt3.93□□□□□ -1.78
ATG40Q99325 SLZ1YNL196C 897 nt3.93□□□□□ -1.78
ATG40Q99325 RCK2YLR248W 1833 nt3.93□□□□□ -1.78
ATG40Q99325 EUG1YDR518W 1554 nt3.93□□□□□ -1.78
ATG40Q99325 CLA4YNL298W 2529 nt3.92□□□□□ -1.78
ATG40Q99325 RAD28YDR030C 1521 nt3.92□□□□□ -1.78
ATG40Q99325 THI20YOL055C 1656 nt3.92□□□□□ -1.78
ATG40Q99325 RIP1YEL024W 648 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)CtK(CUU)C 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)D1tK(CUU)D1 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)D2tK(CUU)D2 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)E1tK(CUU)E1 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)E2tK(CUU)E2 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)FtK(CUU)F 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)G1tK(CUU)G1 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)G2tK(CUU)G2 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)G3tK(CUU)G3 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)ItK(CUU)I 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)JtK(CUU)J 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)KtK(CUU)K 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)MtK(CUU)M 73 nt3.92□□□□□ -1.78
ATG40Q99325 tK(CUU)PtK(CUU)P 73 nt3.92□□□□□ -1.78
ATG40Q99325 YGR016WYGR016W 573 nt3.92□□□□□ -1.78
ATG40Q99325 CPR6YLR216C 1116 nt3.92□□□□□ -1.78
ATG40Q99325 MRPL39YML009C 213 nt3.92□□□□□ -1.78
ATG40Q99325 NPT1YOR209C 1290 nt3.92□□□□□ -1.78
ATG40Q99325 YPR169W-AYPR169W-A 219 nt3.92□□□□□ -1.78
ATG40Q99325 YPR170W-BYPR170W-B 258 nt3.92□□□□□ -1.78
ATG40Q99325 APL6YGR261C 2430 nt3.92□□□□□ -1.78
ATG40Q99325 KGD1YIL125W 3045 nt3.92□□□□□ -1.78
ATG40Q99325 YMR196WYMR196W 3267 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms