Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC38.77■■■■□ 3.8
IFT140Q96RY7 ESRRAP2-201ENST00000418437 1549 ntBASIC38.77■■■■□ 3.8
IFT140Q96RY7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
IFT140Q96RY7 TERF1P2-201ENST00000583350 1212 ntBASIC38.76■■■■□ 3.8
IFT140Q96RY7 RAP2CP1-201ENST00000605103 478 ntBASIC38.76■■■■□ 3.8
IFT140Q96RY7 MIR6084-201ENST00000622012 110 ntBASIC38.76■■■■□ 3.8
IFT140Q96RY7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC38.75■■■■□ 3.79
IFT140Q96RY7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC38.75■■■■□ 3.79
IFT140Q96RY7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC38.74■■■■□ 3.79
IFT140Q96RY7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC38.74■■■■□ 3.79
IFT140Q96RY7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
IFT140Q96RY7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC38.74■■■■□ 3.79
IFT140Q96RY7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 GXYLT1P2-201ENST00000433312 1230 ntBASIC38.73■■■■□ 3.79
IFT140Q96RY7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 KRT18P14-201ENST00000534205 1250 ntBASIC38.73■■■■□ 3.79
IFT140Q96RY7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
IFT140Q96RY7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC38.72■■■■□ 3.79
IFT140Q96RY7 IGHV3-19-201ENST00000521488 291 ntBASIC38.72■■■■□ 3.79
IFT140Q96RY7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
IFT140Q96RY7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
IFT140Q96RY7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
IFT140Q96RY7 NTF6G-201ENST00000591094 616 ntBASIC38.71■■■■□ 3.79
IFT140Q96RY7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC38.71■■■■□ 3.79
IFT140Q96RY7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC38.7■■■■□ 3.79
IFT140Q96RY7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
IFT140Q96RY7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC38.7■■■■□ 3.79
IFT140Q96RY7 MIR572-201ENST00000384983 95 ntBASIC38.7■■■■□ 3.79
IFT140Q96RY7 AL354811.1-201ENST00000610286 706 ntBASIC38.7■■■■□ 3.79
IFT140Q96RY7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
IFT140Q96RY7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
IFT140Q96RY7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
IFT140Q96RY7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC38.67■■■■□ 3.78
IFT140Q96RY7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC38.67■■■■□ 3.78
IFT140Q96RY7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC38.65■■■■□ 3.78
IFT140Q96RY7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC38.65■■■■□ 3.78
IFT140Q96RY7 AC097639.1-201ENST00000565519 1891 ntBASIC38.65■■■■□ 3.78
IFT140Q96RY7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC38.65■■■■□ 3.78
IFT140Q96RY7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
IFT140Q96RY7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC38.64■■■■□ 3.78
IFT140Q96RY7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
IFT140Q96RY7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 AC096887.2-201ENST00000623443 1957 ntBASIC38.63■■■■□ 3.77
IFT140Q96RY7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
IFT140Q96RY7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC38.62■■■■□ 3.77
IFT140Q96RY7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
IFT140Q96RY7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
IFT140Q96RY7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC38.62■■■■□ 3.77
IFT140Q96RY7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
IFT140Q96RY7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC38.61■■■■□ 3.77
IFT140Q96RY7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
IFT140Q96RY7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
IFT140Q96RY7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
IFT140Q96RY7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
IFT140Q96RY7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
IFT140Q96RY7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
IFT140Q96RY7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
IFT140Q96RY7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
IFT140Q96RY7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC38.59■■■■□ 3.77
IFT140Q96RY7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC38.59■■■■□ 3.77
IFT140Q96RY7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms