Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC38.77■■■■□ 3.8
IFT140Q96RY7 ESRRAP2-201ENST00000418437 1549 ntBASIC38.77■■■■□ 3.8
IFT140Q96RY7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
IFT140Q96RY7 TERF1P2-201ENST00000583350 1212 ntBASIC38.76■■■■□ 3.8
IFT140Q96RY7 RAP2CP1-201ENST00000605103 478 ntBASIC38.76■■■■□ 3.8
IFT140Q96RY7 MIR6084-201ENST00000622012 110 ntBASIC38.76■■■■□ 3.8
IFT140Q96RY7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC38.75■■■■□ 3.79
IFT140Q96RY7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC38.75■■■■□ 3.79
IFT140Q96RY7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC38.75■■■■□ 3.79
IFT140Q96RY7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC38.74■■■■□ 3.79
IFT140Q96RY7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC38.74■■■■□ 3.79
IFT140Q96RY7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
IFT140Q96RY7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC38.74■■■■□ 3.79
IFT140Q96RY7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 GXYLT1P2-201ENST00000433312 1230 ntBASIC38.73■■■■□ 3.79
IFT140Q96RY7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
IFT140Q96RY7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 KRT18P14-201ENST00000534205 1250 ntBASIC38.73■■■■□ 3.79
IFT140Q96RY7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC38.73■■■■□ 3.79
IFT140Q96RY7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
IFT140Q96RY7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC38.72■■■■□ 3.79
IFT140Q96RY7 IGHV3-19-201ENST00000521488 291 ntBASIC38.72■■■■□ 3.79
IFT140Q96RY7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
IFT140Q96RY7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
IFT140Q96RY7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
IFT140Q96RY7 NTF6G-201ENST00000591094 616 ntBASIC38.71■■■■□ 3.79
IFT140Q96RY7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC38.71■■■■□ 3.79
IFT140Q96RY7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC38.7■■■■□ 3.79
IFT140Q96RY7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
IFT140Q96RY7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC38.7■■■■□ 3.79
IFT140Q96RY7 MIR572-201ENST00000384983 95 ntBASIC38.7■■■■□ 3.79
IFT140Q96RY7 AL354811.1-201ENST00000610286 706 ntBASIC38.7■■■■□ 3.79
IFT140Q96RY7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
IFT140Q96RY7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
IFT140Q96RY7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC38.69■■■■□ 3.78
IFT140Q96RY7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
IFT140Q96RY7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC38.67■■■■□ 3.78
IFT140Q96RY7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC38.67■■■■□ 3.78
IFT140Q96RY7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC38.66■■■■□ 3.78
IFT140Q96RY7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC38.65■■■■□ 3.78
IFT140Q96RY7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC38.65■■■■□ 3.78
IFT140Q96RY7 AC097639.1-201ENST00000565519 1891 ntBASIC38.65■■■■□ 3.78
IFT140Q96RY7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC38.65■■■■□ 3.78
IFT140Q96RY7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
IFT140Q96RY7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
IFT140Q96RY7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC38.64■■■■□ 3.78
IFT140Q96RY7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
IFT140Q96RY7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 AC096887.2-201ENST00000623443 1957 ntBASIC38.63■■■■□ 3.77
IFT140Q96RY7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
IFT140Q96RY7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC38.63■■■■□ 3.77
IFT140Q96RY7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
IFT140Q96RY7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC38.62■■■■□ 3.77
IFT140Q96RY7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
IFT140Q96RY7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
IFT140Q96RY7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC38.62■■■■□ 3.77
IFT140Q96RY7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
IFT140Q96RY7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC38.61■■■■□ 3.77
IFT140Q96RY7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
IFT140Q96RY7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
IFT140Q96RY7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
IFT140Q96RY7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
IFT140Q96RY7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC38.6■■■■□ 3.77
IFT140Q96RY7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
IFT140Q96RY7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
IFT140Q96RY7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
IFT140Q96RY7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
IFT140Q96RY7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC38.59■■■■□ 3.77
IFT140Q96RY7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC38.59■■■■□ 3.77
IFT140Q96RY7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms