Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCNX1Q96RV3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCNX1Q96RV3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX1Q96RV3 AC006455.2-201ENST00000429931 906 ntBASIC20.3■□□□□ 0.84
PCNX1Q96RV3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCNX1Q96RV3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 AL121749.1-202ENST00000609313 2153 ntBASIC20.29■□□□□ 0.84
PCNX1Q96RV3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCNX1Q96RV3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.28■□□□□ 0.84
PCNX1Q96RV3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCNX1Q96RV3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCNX1Q96RV3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCNX1Q96RV3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.27■□□□□ 0.83
PCNX1Q96RV3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 AC027682.1-201ENST00000562846 899 ntBASIC20.26■□□□□ 0.83
PCNX1Q96RV3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 AC099791.1-201ENST00000416440 715 ntBASIC20.26■□□□□ 0.83
PCNX1Q96RV3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCNX1Q96RV3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCNX1Q96RV3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX1Q96RV3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.25■□□□□ 0.83
PCNX1Q96RV3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX1Q96RV3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCNX1Q96RV3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.25■□□□□ 0.83
PCNX1Q96RV3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.25■□□□□ 0.83
PCNX1Q96RV3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.24■□□□□ 0.83
PCNX1Q96RV3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX1Q96RV3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX1Q96RV3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX1Q96RV3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCNX1Q96RV3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.23■□□□□ 0.83
PCNX1Q96RV3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCNX1Q96RV3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCNX1Q96RV3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX1Q96RV3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.21■□□□□ 0.83
PCNX1Q96RV3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.21■□□□□ 0.83
PCNX1Q96RV3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCNX1Q96RV3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCNX1Q96RV3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 AC233992.3-201ENST00000607491 485 ntBASIC20.2■□□□□ 0.82
PCNX1Q96RV3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.2■□□□□ 0.82
PCNX1Q96RV3 AC241377.3-202ENST00000626088 1088 ntBASIC20.2■□□□□ 0.82
PCNX1Q96RV3 AC241585.3-202ENST00000628937 1088 ntBASIC20.2■□□□□ 0.82
PCNX1Q96RV3 AC245100.8-202ENST00000629247 1058 ntBASIC20.2■□□□□ 0.82
PCNX1Q96RV3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCNX1Q96RV3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms