Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TM9SF4Q92544 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.52■■□□□ 1.04
TM9SF4Q92544 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.52■■□□□ 1.04
TM9SF4Q92544 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TM9SF4Q92544 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TM9SF4Q92544 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.52■■□□□ 1.03
TM9SF4Q92544 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
TM9SF4Q92544 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.52■■□□□ 1.03
TM9SF4Q92544 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TM9SF4Q92544 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM9SF4Q92544 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.51■■□□□ 1.03
TM9SF4Q92544 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM9SF4Q92544 MIR6722-201ENST00000617286 78 ntBASIC21.51■■□□□ 1.03
TM9SF4Q92544 AC110285.6-201ENST00000617652 491 ntBASIC21.51■■□□□ 1.03
TM9SF4Q92544 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM9SF4Q92544 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TM9SF4Q92544 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM9SF4Q92544 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TM9SF4Q92544 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TM9SF4Q92544 AC133561.4-201ENST00000566112 224 ntBASIC21.5■■□□□ 1.03
TM9SF4Q92544 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.5■■□□□ 1.03
TM9SF4Q92544 MIR4466-201ENST00000606121 54 ntBASIC21.5■■□□□ 1.03
TM9SF4Q92544 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.5■■□□□ 1.03
TM9SF4Q92544 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM9SF4Q92544 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM9SF4Q92544 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.5■■□□□ 1.03
TM9SF4Q92544 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM9SF4Q92544 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TM9SF4Q92544 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TM9SF4Q92544 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM9SF4Q92544 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TM9SF4Q92544 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM9SF4Q92544 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM9SF4Q92544 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TM9SF4Q92544 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.49■■□□□ 1.03
TM9SF4Q92544 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.49■■□□□ 1.03
TM9SF4Q92544 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TM9SF4Q92544 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM9SF4Q92544 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.48■■□□□ 1.03
TM9SF4Q92544 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM9SF4Q92544 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.48■■□□□ 1.03
TM9SF4Q92544 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TM9SF4Q92544 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TM9SF4Q92544 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.48■■□□□ 1.03
TM9SF4Q92544 AC005837.3-201ENST00000612163 286 ntBASIC21.48■■□□□ 1.03
TM9SF4Q92544 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM9SF4Q92544 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TM9SF4Q92544 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 AC133561.1-201ENST00000568600 2415 ntBASIC21.47■■□□□ 1.03
TM9SF4Q92544 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 AL512631.2-201ENST00000604634 923 ntBASIC21.47■■□□□ 1.03
TM9SF4Q92544 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TM9SF4Q92544 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.47■■□□□ 1.03
TM9SF4Q92544 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TM9SF4Q92544 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.46■■□□□ 1.03
TM9SF4Q92544 SNX5-217ENST00000606557 1087 ntBASIC21.46■■□□□ 1.03
TM9SF4Q92544 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TM9SF4Q92544 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.03
TM9SF4Q92544 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM9SF4Q92544 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM9SF4Q92544 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TM9SF4Q92544 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM9SF4Q92544 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM9SF4Q92544 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TM9SF4Q92544 AC097639.1-201ENST00000565519 1891 ntBASIC21.44■■□□□ 1.02
TM9SF4Q92544 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TM9SF4Q92544 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
TM9SF4Q92544 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TM9SF4Q92544 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TM9SF4Q92544 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.43■■□□□ 1.02
TM9SF4Q92544 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.43■■□□□ 1.02
TM9SF4Q92544 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.43■■□□□ 1.02
TM9SF4Q92544 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.43■■□□□ 1.02
TM9SF4Q92544 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TM9SF4Q92544 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TM9SF4Q92544 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TM9SF4Q92544 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TM9SF4Q92544 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TM9SF4Q92544 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TM9SF4Q92544 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TM9SF4Q92544 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.42■■□□□ 1.02
TM9SF4Q92544 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TM9SF4Q92544 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TM9SF4Q92544 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.42■■□□□ 1.02
TM9SF4Q92544 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TM9SF4Q92544 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TM9SF4Q92544 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.41■■□□□ 1.02
TM9SF4Q92544 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms