Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
STAG1Q8WVM7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
STAG1Q8WVM7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
STAG1Q8WVM7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
STAG1Q8WVM7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.12■■□□□ 1.93
STAG1Q8WVM7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.12■■□□□ 1.93
STAG1Q8WVM7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
STAG1Q8WVM7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
STAG1Q8WVM7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
STAG1Q8WVM7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27.1■■□□□ 1.93
STAG1Q8WVM7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.1■■□□□ 1.93
STAG1Q8WVM7 MIR6724-1-201ENST00000616420 92 ntBASIC27.1■■□□□ 1.93
STAG1Q8WVM7 MIR6724-2-201ENST00000616483 92 ntBASIC27.1■■□□□ 1.93
STAG1Q8WVM7 MIR6724-4-201ENST00000617390 92 ntBASIC27.1■■□□□ 1.93
STAG1Q8WVM7 MIR6724-3-201ENST00000622482 92 ntBASIC27.1■■□□□ 1.93
STAG1Q8WVM7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
STAG1Q8WVM7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
STAG1Q8WVM7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
STAG1Q8WVM7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
STAG1Q8WVM7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
STAG1Q8WVM7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
STAG1Q8WVM7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
STAG1Q8WVM7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 AC004812.2-201ENST00000611079 2094 ntBASIC27.08■■□□□ 1.93
STAG1Q8WVM7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
STAG1Q8WVM7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
STAG1Q8WVM7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
STAG1Q8WVM7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
STAG1Q8WVM7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
STAG1Q8WVM7 ALDH1A3-203ENST00000557963 1670 ntBASIC27.07■■□□□ 1.92
STAG1Q8WVM7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.07■■□□□ 1.92
STAG1Q8WVM7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
STAG1Q8WVM7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.06■■□□□ 1.92
STAG1Q8WVM7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 AC008406.3-201ENST00000620001 1374 ntBASIC27.05■■□□□ 1.92
STAG1Q8WVM7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.05■■□□□ 1.92
STAG1Q8WVM7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
STAG1Q8WVM7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
STAG1Q8WVM7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.03■■□□□ 1.92
STAG1Q8WVM7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
STAG1Q8WVM7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.03■■□□□ 1.92
STAG1Q8WVM7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 AC005703.6-201ENST00000623265 1329 ntBASIC27.02■■□□□ 1.92
STAG1Q8WVM7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 AL117332.1-201ENST00000622628 974 ntBASIC27.02■■□□□ 1.92
STAG1Q8WVM7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.02■■□□□ 1.92
STAG1Q8WVM7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
STAG1Q8WVM7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
STAG1Q8WVM7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.01■■□□□ 1.91
STAG1Q8WVM7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
STAG1Q8WVM7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
STAG1Q8WVM7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27■■□□□ 1.91
STAG1Q8WVM7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
STAG1Q8WVM7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27■■□□□ 1.91
STAG1Q8WVM7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
STAG1Q8WVM7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
STAG1Q8WVM7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
STAG1Q8WVM7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
STAG1Q8WVM7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
STAG1Q8WVM7 MIR3621-201ENST00000580529 85 ntBASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms