Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C3orf56Q8N813 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C3orf56Q8N813 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L2-201ENST00000561772 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
C3orf56Q8N813 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L6-201ENST00000626483 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L1-201ENST00000627662 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L8-201ENST00000629013 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L3-201ENST00000630187 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L7-201ENST00000630678 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 DUX4L5-201ENST00000630834 1275 ntBASIC17.92■□□□□ 0.46
C3orf56Q8N813 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C3orf56Q8N813 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C3orf56Q8N813 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.91■□□□□ 0.46
C3orf56Q8N813 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
C3orf56Q8N813 AL031602.1-201ENST00000633169 911 ntBASIC17.91■□□□□ 0.46
C3orf56Q8N813 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.91■□□□□ 0.46
C3orf56Q8N813 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 AC009102.2-201ENST00000606772 1639 ntBASIC17.9■□□□□ 0.46
C3orf56Q8N813 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C3orf56Q8N813 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C3orf56Q8N813 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C3orf56Q8N813 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 AL358852.1-201ENST00000623174 1268 ntBASIC17.9■□□□□ 0.46
C3orf56Q8N813 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C3orf56Q8N813 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
C3orf56Q8N813 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C3orf56Q8N813 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
C3orf56Q8N813 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C3orf56Q8N813 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.89■□□□□ 0.45
C3orf56Q8N813 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.89■□□□□ 0.45
C3orf56Q8N813 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C3orf56Q8N813 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.89■□□□□ 0.45
C3orf56Q8N813 AC009086.3-201ENST00000623486 1008 ntBASIC17.89■□□□□ 0.45
C3orf56Q8N813 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
C3orf56Q8N813 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C3orf56Q8N813 TSPY26P-201ENST00000476365 1326 ntBASIC17.89■□□□□ 0.45
C3orf56Q8N813 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.89■□□□□ 0.45
C3orf56Q8N813 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C3orf56Q8N813 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C3orf56Q8N813 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.89■□□□□ 0.45
C3orf56Q8N813 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C3orf56Q8N813 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
C3orf56Q8N813 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.88■□□□□ 0.45
C3orf56Q8N813 HLA-L-209ENST00000420110 1011 ntBASIC17.88■□□□□ 0.45
C3orf56Q8N813 AC123595.1-201ENST00000440769 1046 ntBASIC17.88■□□□□ 0.45
C3orf56Q8N813 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.88■□□□□ 0.45
C3orf56Q8N813 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C3orf56Q8N813 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.88■□□□□ 0.45
C3orf56Q8N813 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C3orf56Q8N813 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C3orf56Q8N813 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C3orf56Q8N813 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.87■□□□□ 0.45
C3orf56Q8N813 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.87■□□□□ 0.45
C3orf56Q8N813 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.87■□□□□ 0.45
C3orf56Q8N813 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.87■□□□□ 0.45
C3orf56Q8N813 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
C3orf56Q8N813 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C3orf56Q8N813 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C3orf56Q8N813 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C3orf56Q8N813 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C3orf56Q8N813 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C3orf56Q8N813 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.86■□□□□ 0.45
C3orf56Q8N813 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C3orf56Q8N813 MIR3181-201ENST00000578512 73 ntBASIC17.86■□□□□ 0.45
C3orf56Q8N813 NTF6G-201ENST00000591094 616 ntBASIC17.86■□□□□ 0.45
C3orf56Q8N813 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C3orf56Q8N813 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
C3orf56Q8N813 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C3orf56Q8N813 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
C3orf56Q8N813 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C3orf56Q8N813 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C3orf56Q8N813 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C3orf56Q8N813 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 AC027612.3-201ENST00000413684 1047 ntBASIC17.85■□□□□ 0.45
C3orf56Q8N813 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C3orf56Q8N813 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.85■□□□□ 0.45
C3orf56Q8N813 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms