Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH20Q8N6Y1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH20Q8N6Y1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH20Q8N6Y1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH20Q8N6Y1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDH20Q8N6Y1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH20Q8N6Y1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 MIR3621-201ENST00000580529 85 ntBASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 AL356740.2-201ENST00000601559 647 ntBASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDH20Q8N6Y1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH20Q8N6Y1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH20Q8N6Y1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDH20Q8N6Y1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH20Q8N6Y1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH20Q8N6Y1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDH20Q8N6Y1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH20Q8N6Y1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH20Q8N6Y1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH20Q8N6Y1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH20Q8N6Y1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDH20Q8N6Y1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH20Q8N6Y1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH20Q8N6Y1 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.27■■□□□ 1.31
PCDH20Q8N6Y1 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.27■■□□□ 1.31
PCDH20Q8N6Y1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
PCDH20Q8N6Y1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
PCDH20Q8N6Y1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 AC005703.6-201ENST00000623265 1329 ntBASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH20Q8N6Y1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH20Q8N6Y1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDH20Q8N6Y1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH20Q8N6Y1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDH20Q8N6Y1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDH20Q8N6Y1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDH20Q8N6Y1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH20Q8N6Y1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDH20Q8N6Y1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms