Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC9BQ8N6N2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC9BQ8N6N2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TTC9BQ8N6N2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 SRD5A1P1-201ENST00000442297 786 ntBASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.18■■□□□ 1.46
TTC9BQ8N6N2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 AC138932.3-201ENST00000567634 1902 ntBASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TTC9BQ8N6N2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 UNC93B3-201ENST00000308076 687 ntBASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 AC005837.3-201ENST00000612163 286 ntBASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.16■■□□□ 1.46
TTC9BQ8N6N2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TTC9BQ8N6N2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
TTC9BQ8N6N2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 PBX2P1-201ENST00000493219 1291 ntBASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 AC020928.2-201ENST00000588717 2197 ntBASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.14■■□□□ 1.45
TTC9BQ8N6N2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 AC106739.1-201ENST00000617035 715 ntBASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TTC9BQ8N6N2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 AL136162.1-201ENST00000607711 1078 ntBASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 AC009102.2-201ENST00000606772 1639 ntBASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TTC9BQ8N6N2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
TTC9BQ8N6N2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TTC9BQ8N6N2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.11■■□□□ 1.45
TTC9BQ8N6N2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.11■■□□□ 1.45
TTC9BQ8N6N2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 MIR935-201ENST00000401179 91 ntBASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TTC9BQ8N6N2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 AC024257.2-201ENST00000549699 147 ntBASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC9BQ8N6N2 AP003733.4-201ENST00000623785 1697 ntBASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TTC9BQ8N6N2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms