Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SYNPOQ8N3V7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYNPOQ8N3V7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.37■■□□□ 1.33
SYNPOQ8N3V7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.37■■□□□ 1.33
SYNPOQ8N3V7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
SYNPOQ8N3V7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 AC099791.2-201ENST00000605725 427 ntBASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SYNPOQ8N3V7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.35■■□□□ 1.33
SYNPOQ8N3V7 AC131274.2-201ENST00000580697 1507 ntBASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 AC145676.1-201ENST00000514988 2004 ntBASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 IRS3P-201ENST00000223076 1006 ntBASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SYNPOQ8N3V7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 AC241377.3-202ENST00000626088 1088 ntBASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 AC241585.3-202ENST00000628937 1088 ntBASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 AC245100.8-202ENST00000629247 1058 ntBASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.33■■□□□ 1.33
SYNPOQ8N3V7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SYNPOQ8N3V7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SYNPOQ8N3V7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 AC087623.3-201ENST00000607047 1098 ntBASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.31■■□□□ 1.32
SYNPOQ8N3V7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 AC009102.2-201ENST00000606772 1639 ntBASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 AL162430.1-201ENST00000480705 870 ntBASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 AC008764.7-201ENST00000593779 1081 ntBASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 AC135731.1-201ENST00000569415 2548 ntBASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.3■■□□□ 1.32
SYNPOQ8N3V7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.29■■□□□ 1.32
SYNPOQ8N3V7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SYNPOQ8N3V7 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.29■■□□□ 1.32
SYNPOQ8N3V7 AC136469.2-201ENST00000623944 1028 ntBASIC23.29■■□□□ 1.32
SYNPOQ8N3V7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SYNPOQ8N3V7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SYNPOQ8N3V7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SYNPOQ8N3V7 AC099791.1-201ENST00000416440 715 ntBASIC23.28■■□□□ 1.32
SYNPOQ8N3V7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.28■■□□□ 1.32
SYNPOQ8N3V7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.28■■□□□ 1.32
SYNPOQ8N3V7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.28■■□□□ 1.32
SYNPOQ8N3V7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 C17orf82-201ENST00000623772 1530 ntBASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.27■■□□□ 1.32
SYNPOQ8N3V7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SYNPOQ8N3V7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
SYNPOQ8N3V7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SYNPOQ8N3V7 AL022069.1-201ENST00000568025 1636 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms