Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SMC5Q8IY18 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.5■■■□□ 2.15
SMC5Q8IY18 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SMC5Q8IY18 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
SMC5Q8IY18 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMC5Q8IY18 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMC5Q8IY18 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMC5Q8IY18 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.49■■■□□ 2.15
SMC5Q8IY18 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMC5Q8IY18 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.48■■■□□ 2.15
SMC5Q8IY18 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMC5Q8IY18 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.48■■■□□ 2.15
SMC5Q8IY18 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMC5Q8IY18 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMC5Q8IY18 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
SMC5Q8IY18 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SMC5Q8IY18 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SMC5Q8IY18 MIR4281-201ENST00000580852 62 ntBASIC28.47■■■□□ 2.15
SMC5Q8IY18 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
SMC5Q8IY18 AC012676.1-201ENST00000574705 1949 ntBASIC28.47■■■□□ 2.15
SMC5Q8IY18 ME2-208ENST00000638937 2471 ntTSL 5 BASIC28.47■■■□□ 2.15
SMC5Q8IY18 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SMC5Q8IY18 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.46■■■□□ 2.15
SMC5Q8IY18 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
SMC5Q8IY18 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.46■■■□□ 2.15
SMC5Q8IY18 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.46■■■□□ 2.15
SMC5Q8IY18 AC012354.3-201ENST00000623734 483 ntBASIC28.46■■■□□ 2.15
SMC5Q8IY18 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SMC5Q8IY18 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SMC5Q8IY18 ANOS2P-203ENST00000472227 1816 ntBASIC28.46■■■□□ 2.15
SMC5Q8IY18 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SMC5Q8IY18 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.45■■■□□ 2.15
SMC5Q8IY18 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
SMC5Q8IY18 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SMC5Q8IY18 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.45■■■□□ 2.14
SMC5Q8IY18 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.45■■■□□ 2.14
SMC5Q8IY18 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
SMC5Q8IY18 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SMC5Q8IY18 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.44■■■□□ 2.14
SMC5Q8IY18 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
SMC5Q8IY18 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.44■■■□□ 2.14
SMC5Q8IY18 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.44■■■□□ 2.14
SMC5Q8IY18 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.44■■■□□ 2.14
SMC5Q8IY18 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.44■■■□□ 2.14
SMC5Q8IY18 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SMC5Q8IY18 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 ALDH1A3-203ENST00000557963 1670 ntBASIC28.43■■■□□ 2.14
SMC5Q8IY18 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 MIR4508-201ENST00000584178 70 ntBASIC28.43■■■□□ 2.14
SMC5Q8IY18 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SMC5Q8IY18 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
SMC5Q8IY18 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.42■■■□□ 2.14
SMC5Q8IY18 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SMC5Q8IY18 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.42■■■□□ 2.14
SMC5Q8IY18 AC103834.1-201ENST00000520383 144 ntBASIC28.42■■■□□ 2.14
SMC5Q8IY18 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.42■■■□□ 2.14
SMC5Q8IY18 THA1P-201ENST00000590384 1145 ntBASIC28.42■■■□□ 2.14
SMC5Q8IY18 AC092068.2-201ENST00000590491 1708 ntBASIC28.42■■■□□ 2.14
SMC5Q8IY18 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
SMC5Q8IY18 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SMC5Q8IY18 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMC5Q8IY18 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMC5Q8IY18 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SMC5Q8IY18 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.41■■■□□ 2.14
SMC5Q8IY18 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
SMC5Q8IY18 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.41■■■□□ 2.14
SMC5Q8IY18 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.41■■■□□ 2.14
SMC5Q8IY18 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMC5Q8IY18 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMC5Q8IY18 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SMC5Q8IY18 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
SMC5Q8IY18 C9orf163-202ENST00000624034 2573 ntBASIC28.41■■■□□ 2.14
SMC5Q8IY18 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SMC5Q8IY18 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SMC5Q8IY18 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SMC5Q8IY18 AL033527.3-201ENST00000566366 1196 ntBASIC28.4■■■□□ 2.14
SMC5Q8IY18 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SMC5Q8IY18 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SMC5Q8IY18 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.39■■■□□ 2.14
SMC5Q8IY18 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SMC5Q8IY18 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.39■■■□□ 2.14
SMC5Q8IY18 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SMC5Q8IY18 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
SMC5Q8IY18 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
SMC5Q8IY18 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SMC5Q8IY18 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
SMC5Q8IY18 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMC5Q8IY18 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMC5Q8IY18 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMC5Q8IY18 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.38■■■□□ 2.13
SMC5Q8IY18 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMC5Q8IY18 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
SMC5Q8IY18 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms