Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.56■■□□□ 1.52
VPS36Q86VN1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
VPS36Q86VN1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
VPS36Q86VN1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS36Q86VN1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS36Q86VN1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS36Q86VN1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.56■■□□□ 1.52
VPS36Q86VN1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
VPS36Q86VN1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
VPS36Q86VN1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
VPS36Q86VN1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.55■■□□□ 1.52
VPS36Q86VN1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
VPS36Q86VN1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.55■■□□□ 1.52
VPS36Q86VN1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS36Q86VN1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
VPS36Q86VN1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
VPS36Q86VN1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
VPS36Q86VN1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS36Q86VN1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS36Q86VN1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS36Q86VN1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS36Q86VN1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS36Q86VN1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS36Q86VN1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS36Q86VN1 AC022616.5-201ENST00000518796 181 ntBASIC24.53■■□□□ 1.52
VPS36Q86VN1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS36Q86VN1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
VPS36Q86VN1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS36Q86VN1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS36Q86VN1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
VPS36Q86VN1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS36Q86VN1 AC139795.1-202ENST00000500444 432 ntBASIC24.52■■□□□ 1.52
VPS36Q86VN1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS36Q86VN1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS36Q86VN1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS36Q86VN1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS36Q86VN1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
VPS36Q86VN1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS36Q86VN1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS36Q86VN1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
VPS36Q86VN1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS36Q86VN1 AC004987.1-201ENST00000428627 508 ntBASIC24.51■■□□□ 1.51
VPS36Q86VN1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS36Q86VN1 AC019171.1-201ENST00000601251 1056 ntBASIC24.51■■□□□ 1.51
VPS36Q86VN1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS36Q86VN1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS36Q86VN1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.51■■□□□ 1.51
VPS36Q86VN1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS36Q86VN1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.5■■□□□ 1.51
VPS36Q86VN1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
VPS36Q86VN1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS36Q86VN1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS36Q86VN1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS36Q86VN1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS36Q86VN1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.5■■□□□ 1.51
VPS36Q86VN1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VPS36Q86VN1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS36Q86VN1 TSPY13P-201ENST00000338964 914 ntBASIC24.49■■□□□ 1.51
VPS36Q86VN1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
VPS36Q86VN1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS36Q86VN1 ATP5G2P3-201ENST00000429083 425 ntBASIC24.49■■□□□ 1.51
VPS36Q86VN1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.49■■□□□ 1.51
VPS36Q86VN1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.49■■□□□ 1.51
VPS36Q86VN1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
VPS36Q86VN1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS36Q86VN1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.49■■□□□ 1.51
VPS36Q86VN1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS36Q86VN1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS36Q86VN1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VPS36Q86VN1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
VPS36Q86VN1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS36Q86VN1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS36Q86VN1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS36Q86VN1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS36Q86VN1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS36Q86VN1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
VPS36Q86VN1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VPS36Q86VN1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.47■■□□□ 1.51
VPS36Q86VN1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.47■■□□□ 1.51
VPS36Q86VN1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.47■■□□□ 1.51
VPS36Q86VN1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
VPS36Q86VN1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.46■■□□□ 1.51
VPS36Q86VN1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.46■■□□□ 1.51
VPS36Q86VN1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
VPS36Q86VN1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms