Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC190Q86UF4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 AC097358.2-201ENST00000607541 1159 ntBASIC19.99■□□□□ 0.79
CCDC190Q86UF4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC190Q86UF4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC190Q86UF4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC190Q86UF4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC190Q86UF4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC190Q86UF4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC190Q86UF4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC190Q86UF4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC190Q86UF4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC190Q86UF4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.95■□□□□ 0.78
CCDC190Q86UF4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC190Q86UF4 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.95■□□□□ 0.78
CCDC190Q86UF4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC190Q86UF4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 MIR219A2-201ENST00000608502 1504 ntBASIC19.93■□□□□ 0.78
CCDC190Q86UF4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC190Q86UF4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 AC073130.3-201ENST00000624389 2278 ntBASIC19.92■□□□□ 0.78
CCDC190Q86UF4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC190Q86UF4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 DUX4L28-201ENST00000623687 678 ntBASIC19.91■□□□□ 0.78
CCDC190Q86UF4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC190Q86UF4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms