Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 CCDC92B-201ENST00000575506 885 ntBASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 MIR6084-201ENST00000622012 110 ntBASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PTCRAQ6ISU1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PTCRAQ6ISU1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCRAQ6ISU1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTCRAQ6ISU1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PTCRAQ6ISU1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PTCRAQ6ISU1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
PTCRAQ6ISU1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.95■■□□□ 1.42
PTCRAQ6ISU1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.95■■□□□ 1.42
PTCRAQ6ISU1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTCRAQ6ISU1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTCRAQ6ISU1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCRAQ6ISU1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTCRAQ6ISU1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTCRAQ6ISU1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.94■■□□□ 1.42
PTCRAQ6ISU1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 ABHD17AP1-201ENST00000358206 933 ntBASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.93■■□□□ 1.42
PTCRAQ6ISU1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTCRAQ6ISU1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 KRT18P14-201ENST00000534205 1250 ntBASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTCRAQ6ISU1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 AC012414.1-201ENST00000556676 535 ntBASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PTCRAQ6ISU1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PTCRAQ6ISU1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTCRAQ6ISU1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.42
PTCRAQ6ISU1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PTCRAQ6ISU1 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.89■■□□□ 1.41
PTCRAQ6ISU1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PTCRAQ6ISU1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.89■■□□□ 1.41
PTCRAQ6ISU1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTCRAQ6ISU1 AC131274.2-201ENST00000580697 1507 ntBASIC23.89■■□□□ 1.41
PTCRAQ6ISU1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 AL354811.1-201ENST00000610286 706 ntBASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCRAQ6ISU1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 MIR572-201ENST00000384983 95 ntBASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 AC080038.1-201ENST00000611274 1154 ntBASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.87■■□□□ 1.41
PTCRAQ6ISU1 AC097639.1-201ENST00000565519 1891 ntBASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCRAQ6ISU1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PTCRAQ6ISU1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms