Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.33■■□□□ 1.81
SNRNP48Q6IEG0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNRNP48Q6IEG0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNRNP48Q6IEG0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNRNP48Q6IEG0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
SNRNP48Q6IEG0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 AC092171.4-201ENST00000609130 632 ntBASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
SNRNP48Q6IEG0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.31■■□□□ 1.8
SNRNP48Q6IEG0 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.31■■□□□ 1.8
SNRNP48Q6IEG0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNRNP48Q6IEG0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.31■■□□□ 1.8
SNRNP48Q6IEG0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNRNP48Q6IEG0 HLA-L-211ENST00000482052 1765 ntBASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 AC099791.2-201ENST00000605725 427 ntBASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.3■■□□□ 1.8
SNRNP48Q6IEG0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 AF213884.3-201ENST00000563833 479 ntBASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRNP48Q6IEG0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 SERBP1P1-201ENST00000396021 1160 ntBASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRNP48Q6IEG0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 AL136967.2-201ENST00000623968 743 ntBASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.27■■□□□ 1.8
SNRNP48Q6IEG0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 MIR4767-201ENST00000582827 78 ntBASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
SNRNP48Q6IEG0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 C17orf82-201ENST00000623772 1530 ntBASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 MIR939-201ENST00000401314 82 ntBASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 AP001330.3-201ENST00000520123 633 ntBASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP48Q6IEG0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 AC105265.2-201ENST00000467189 838 ntBASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP48Q6IEG0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms