Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF213Q63HN8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF213Q63HN8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF213Q63HN8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF213Q63HN8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RNF213Q63HN8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RNF213Q63HN8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
RNF213Q63HN8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
RNF213Q63HN8 AP005435.1-201ENST00000529293 1178 ntBASIC12.53□□□□□ -0.4
RNF213Q63HN8 GCSHP5-201ENST00000443090 522 ntBASIC12.53□□□□□ -0.4
RNF213Q63HN8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF213Q63HN8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.53□□□□□ -0.4
RNF213Q63HN8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RNF213Q63HN8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC12.53□□□□□ -0.4
RNF213Q63HN8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
RNF213Q63HN8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF213Q63HN8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF213Q63HN8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC12.52□□□□□ -0.4
RNF213Q63HN8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF213Q63HN8 AC137761.2-201ENST00000561729 223 ntBASIC12.52□□□□□ -0.4
RNF213Q63HN8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.52□□□□□ -0.4
RNF213Q63HN8 AC145350.3-201ENST00000569033 163 ntBASIC12.52□□□□□ -0.4
RNF213Q63HN8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RNF213Q63HN8 C17orf82-201ENST00000623772 1530 ntBASIC12.52□□□□□ -0.4
RNF213Q63HN8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF213Q63HN8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.52□□□□□ -0.41
RNF213Q63HN8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
RNF213Q63HN8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF213Q63HN8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RNF213Q63HN8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF213Q63HN8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF213Q63HN8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF213Q63HN8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 AL050303.2-201ENST00000619798 666 ntBASIC12.51□□□□□ -0.41
RNF213Q63HN8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF213Q63HN8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF213Q63HN8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF213Q63HN8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF213Q63HN8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF213Q63HN8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF213Q63HN8 BX255925.1-201ENST00000566954 1854 ntBASIC12.5□□□□□ -0.41
RNF213Q63HN8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF213Q63HN8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF213Q63HN8 DBI-210ENST00000542275 757 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 MIR6722-201ENST00000617286 78 ntBASIC12.5□□□□□ -0.41
RNF213Q63HN8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF213Q63HN8 AL139393.2-201ENST00000608721 2025 ntBASIC12.5□□□□□ -0.41
RNF213Q63HN8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF213Q63HN8 ST7-AS1-201ENST00000456775 1889 ntBASIC12.49□□□□□ -0.41
RNF213Q63HN8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RNF213Q63HN8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF213Q63HN8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.49□□□□□ -0.41
RNF213Q63HN8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
RNF213Q63HN8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 BID-214ENST00000617586 542 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF213Q63HN8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF213Q63HN8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF213Q63HN8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF213Q63HN8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF213Q63HN8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF213Q63HN8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF213Q63HN8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF213Q63HN8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF213Q63HN8 BX842568.3-201ENST00000418104 571 ntBASIC12.48□□□□□ -0.41
RNF213Q63HN8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RNF213Q63HN8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF213Q63HN8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RNF213Q63HN8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms