Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARFGEF3Q5TH69 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARFGEF3Q5TH69 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.51■□□□□ 0.71
ARFGEF3Q5TH69 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ARFGEF3Q5TH69 AC106739.1-201ENST00000617035 715 ntBASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARFGEF3Q5TH69 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 AL022069.1-201ENST00000568025 1636 ntBASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 AC133561.4-201ENST00000566112 224 ntBASIC19.49■□□□□ 0.71
ARFGEF3Q5TH69 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARFGEF3Q5TH69 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARFGEF3Q5TH69 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.46■□□□□ 0.71
ARFGEF3Q5TH69 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ARFGEF3Q5TH69 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 AL031432.3-201ENST00000607698 485 ntBASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 AC020928.2-201ENST00000588717 2197 ntBASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARFGEF3Q5TH69 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 C17orf82-201ENST00000623772 1530 ntBASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARFGEF3Q5TH69 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 AC024257.2-201ENST00000549699 147 ntBASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 AC005837.3-201ENST00000612163 286 ntBASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.42■□□□□ 0.7
ARFGEF3Q5TH69 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.41■□□□□ 0.7
ARFGEF3Q5TH69 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARFGEF3Q5TH69 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARFGEF3Q5TH69 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARFGEF3Q5TH69 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARFGEF3Q5TH69 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms