Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AL022069.1-201ENST00000568025 1636 ntBASIC20.26■□□□□ 0.83
FREM1Q5H8C1 LINC00543-201ENST00000567234 1845 ntBASIC20.26■□□□□ 0.83
FREM1Q5H8C1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FREM1Q5H8C1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 AL356740.2-201ENST00000601559 647 ntBASIC20.25■□□□□ 0.83
FREM1Q5H8C1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.25■□□□□ 0.83
FREM1Q5H8C1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.25■□□□□ 0.83
FREM1Q5H8C1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 LINC01124-201ENST00000409786 2117 ntBASIC20.24■□□□□ 0.83
FREM1Q5H8C1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FREM1Q5H8C1 MIR6722-201ENST00000617286 78 ntBASIC20.24■□□□□ 0.83
FREM1Q5H8C1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 AC005703.6-201ENST00000623265 1329 ntBASIC20.23■□□□□ 0.83
FREM1Q5H8C1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.23■□□□□ 0.83
FREM1Q5H8C1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM1Q5H8C1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM1Q5H8C1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FREM1Q5H8C1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FREM1Q5H8C1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.22■□□□□ 0.83
FREM1Q5H8C1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
FREM1Q5H8C1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FREM1Q5H8C1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FREM1Q5H8C1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FREM1Q5H8C1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FREM1Q5H8C1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.19■□□□□ 0.82
FREM1Q5H8C1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FREM1Q5H8C1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 AC004812.2-201ENST00000611079 2094 ntBASIC20.18■□□□□ 0.82
FREM1Q5H8C1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FREM1Q5H8C1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FREM1Q5H8C1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.16■□□□□ 0.82
FREM1Q5H8C1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms