Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.29■■□□□ 1.16
CCSMST1Q4G0I0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 TSPY9P-201ENST00000440215 945 ntBASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 TSPY11P-201ENST00000442607 1045 ntBASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCSMST1Q4G0I0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 GUSBP5-201ENST00000418136 578 ntBASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 UNC93B8-201ENST00000511903 705 ntBASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCSMST1Q4G0I0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCSMST1Q4G0I0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCSMST1Q4G0I0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.25■■□□□ 1.15
CCSMST1Q4G0I0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCSMST1Q4G0I0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 ALDH1A3-203ENST00000557963 1670 ntBASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CCSMST1Q4G0I0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCSMST1Q4G0I0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCSMST1Q4G0I0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms