Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 MIR5787-201ENST00000611784 55 ntBASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM249Q2WGJ8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 AC142381.3-201ENST00000568208 1670 ntBASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TMEM249Q2WGJ8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM249Q2WGJ8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 AC105265.2-201ENST00000467189 838 ntBASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM249Q2WGJ8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 AC097639.1-201ENST00000565519 1891 ntBASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 DUX4L19-201ENST00000557448 1267 ntBASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 AC104564.3-201ENST00000582367 638 ntBASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM249Q2WGJ8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 AC004448.1-201ENST00000458332 883 ntBASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 AF213884.3-201ENST00000563833 479 ntBASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM249Q2WGJ8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 AL136967.2-201ENST00000623968 743 ntBASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 AC005703.6-201ENST00000623265 1329 ntBASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM249Q2WGJ8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM249Q2WGJ8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 MIR939-201ENST00000401314 82 ntBASIC19.18■□□□□ 0.66
TMEM249Q2WGJ8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms