Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC14.49□□□□□ -0.09
HSPG2P98160 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.49□□□□□ -0.09
HSPG2P98160 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HSPG2P98160 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.48□□□□□ -0.09
HSPG2P98160 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.48□□□□□ -0.09
HSPG2P98160 DRD5P2-201ENST00000421395 2012 ntBASIC14.48□□□□□ -0.09
HSPG2P98160 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HSPG2P98160 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HSPG2P98160 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HSPG2P98160 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.48□□□□□ -0.09
HSPG2P98160 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HSPG2P98160 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HSPG2P98160 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.48□□□□□ -0.09
HSPG2P98160 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.48□□□□□ -0.09
HSPG2P98160 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HSPG2P98160 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HSPG2P98160 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.48□□□□□ -0.09
HSPG2P98160 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
HSPG2P98160 ABCB10P1-201ENST00000614297 2181 ntBASIC14.47□□□□□ -0.09
HSPG2P98160 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.47□□□□□ -0.09
HSPG2P98160 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HSPG2P98160 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
HSPG2P98160 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.47□□□□□ -0.09
HSPG2P98160 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.47□□□□□ -0.09
HSPG2P98160 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.47□□□□□ -0.09
HSPG2P98160 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.47□□□□□ -0.09
HSPG2P98160 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC14.47□□□□□ -0.09
HSPG2P98160 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HSPG2P98160 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
HSPG2P98160 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HSPG2P98160 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.47□□□□□ -0.09
HSPG2P98160 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
HSPG2P98160 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.46□□□□□ -0.09
HSPG2P98160 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.46□□□□□ -0.09
HSPG2P98160 MIR6084-201ENST00000622012 110 ntBASIC14.46□□□□□ -0.09
HSPG2P98160 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HSPG2P98160 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HSPG2P98160 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HSPG2P98160 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.46□□□□□ -0.09
HSPG2P98160 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HSPG2P98160 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.46□□□□□ -0.09
HSPG2P98160 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.46□□□□□ -0.09
HSPG2P98160 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.46□□□□□ -0.09
HSPG2P98160 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HSPG2P98160 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HSPG2P98160 AL109923.1-201ENST00000618799 583 ntBASIC14.45□□□□□ -0.1
HSPG2P98160 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HSPG2P98160 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.45□□□□□ -0.1
HSPG2P98160 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.45□□□□□ -0.1
HSPG2P98160 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.45□□□□□ -0.1
HSPG2P98160 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.45□□□□□ -0.1
HSPG2P98160 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.45□□□□□ -0.1
HSPG2P98160 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HSPG2P98160 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.45□□□□□ -0.1
HSPG2P98160 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.45□□□□□ -0.1
HSPG2P98160 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HSPG2P98160 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HSPG2P98160 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HSPG2P98160 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.45□□□□□ -0.1
HSPG2P98160 AC012414.1-201ENST00000556676 535 ntBASIC14.45□□□□□ -0.1
HSPG2P98160 MIR4651-201ENST00000582622 73 ntBASIC14.45□□□□□ -0.1
HSPG2P98160 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.44□□□□□ -0.1
HSPG2P98160 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.44□□□□□ -0.1
HSPG2P98160 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.44□□□□□ -0.1
HSPG2P98160 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
HSPG2P98160 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.44□□□□□ -0.1
HSPG2P98160 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.44□□□□□ -0.1
HSPG2P98160 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.44□□□□□ -0.1
HSPG2P98160 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.44□□□□□ -0.1
HSPG2P98160 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.44□□□□□ -0.1
HSPG2P98160 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HSPG2P98160 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.43□□□□□ -0.1
HSPG2P98160 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.43□□□□□ -0.1
HSPG2P98160 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HSPG2P98160 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HSPG2P98160 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HSPG2P98160 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms