Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C17orf82-201ENST00000623772 1530 ntBASIC26.3■■□□□ 1.8
CCNA1P78396 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNA1P78396 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNA1P78396 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNA1P78396 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCNA1P78396 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.3■■□□□ 1.8
CCNA1P78396 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CCNA1P78396 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.3■■□□□ 1.8
CCNA1P78396 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCNA1P78396 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNA1P78396 IRS3P-201ENST00000223076 1006 ntBASIC26.29■■□□□ 1.8
CCNA1P78396 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.29■■□□□ 1.8
CCNA1P78396 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNA1P78396 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.29■■□□□ 1.8
CCNA1P78396 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCNA1P78396 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CCNA1P78396 AC099791.1-201ENST00000416440 715 ntBASIC26.28■■□□□ 1.8
CCNA1P78396 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCNA1P78396 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNA1P78396 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.28■■□□□ 1.8
CCNA1P78396 AC136469.2-201ENST00000623944 1028 ntBASIC26.28■■□□□ 1.8
CCNA1P78396 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNA1P78396 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CCNA1P78396 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNA1P78396 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CCNA1P78396 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCNA1P78396 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCNA1P78396 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCNA1P78396 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
CCNA1P78396 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNA1P78396 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CCNA1P78396 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNA1P78396 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.26■■□□□ 1.79
CCNA1P78396 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.26■■□□□ 1.79
CCNA1P78396 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.26■■□□□ 1.79
CCNA1P78396 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCNA1P78396 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNA1P78396 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCNA1P78396 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNA1P78396 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCNA1P78396 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.25■■□□□ 1.79
CCNA1P78396 AC087623.3-201ENST00000607047 1098 ntBASIC26.25■■□□□ 1.79
CCNA1P78396 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCNA1P78396 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNA1P78396 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNA1P78396 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNA1P78396 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNA1P78396 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNA1P78396 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCNA1P78396 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.23■■□□□ 1.79
CCNA1P78396 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNA1P78396 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCNA1P78396 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.22■■□□□ 1.79
CCNA1P78396 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCNA1P78396 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CCNA1P78396 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.22■■□□□ 1.79
CCNA1P78396 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNA1P78396 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNA1P78396 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNA1P78396 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNA1P78396 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCNA1P78396 AL162430.1-201ENST00000480705 870 ntBASIC26.21■■□□□ 1.79
CCNA1P78396 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNA1P78396 AC233992.3-201ENST00000607491 485 ntBASIC26.21■■□□□ 1.79
CCNA1P78396 AC009086.3-201ENST00000623486 1008 ntBASIC26.21■■□□□ 1.79
CCNA1P78396 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNA1P78396 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.21■■□□□ 1.79
CCNA1P78396 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
CCNA1P78396 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.2■■□□□ 1.79
CCNA1P78396 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
CCNA1P78396 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNA1P78396 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNA1P78396 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNA1P78396 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNA1P78396 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.2■■□□□ 1.78
CCNA1P78396 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNA1P78396 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNA1P78396 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCNA1P78396 BX842568.3-201ENST00000418104 571 ntBASIC26.19■■□□□ 1.78
CCNA1P78396 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CCNA1P78396 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNA1P78396 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNA1P78396 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCNA1P78396 AL121749.1-202ENST00000609313 2153 ntBASIC26.19■■□□□ 1.78
CCNA1P78396 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNA1P78396 AC006455.2-201ENST00000429931 906 ntBASIC26.18■■□□□ 1.78
CCNA1P78396 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCNA1P78396 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.18■■□□□ 1.78
CCNA1P78396 MIR3181-201ENST00000578512 73 ntBASIC26.18■■□□□ 1.78
CCNA1P78396 AL161729.1-201ENST00000604104 1402 ntBASIC26.18■■□□□ 1.78
CCNA1P78396 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCNA1P78396 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNA1P78396 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNA1P78396 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNA1P78396 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNA1P78396 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.17■■□□□ 1.78
CCNA1P78396 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.17■■□□□ 1.78
CCNA1P78396 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCNA1P78396 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCNA1P78396 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms