Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2NP61088 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
UBE2NP61088 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.07■□□□□ 0.8
UBE2NP61088 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
UBE2NP61088 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2NP61088 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBE2NP61088 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
UBE2NP61088 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBE2NP61088 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UBE2NP61088 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.06■□□□□ 0.8
UBE2NP61088 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.06■□□□□ 0.8
UBE2NP61088 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.06■□□□□ 0.8
UBE2NP61088 AC131212.1-201ENST00000613771 668 ntBASIC20.06■□□□□ 0.8
UBE2NP61088 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 MIR6724-1-201ENST00000616420 92 ntBASIC20.06■□□□□ 0.8
UBE2NP61088 MIR6724-2-201ENST00000616483 92 ntBASIC20.06■□□□□ 0.8
UBE2NP61088 MIR6724-4-201ENST00000617390 92 ntBASIC20.06■□□□□ 0.8
UBE2NP61088 MIR6724-3-201ENST00000622482 92 ntBASIC20.06■□□□□ 0.8
UBE2NP61088 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
UBE2NP61088 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBE2NP61088 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2NP61088 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2NP61088 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2NP61088 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2NP61088 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.05■□□□□ 0.8
UBE2NP61088 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UBE2NP61088 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
UBE2NP61088 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2NP61088 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2NP61088 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.05■□□□□ 0.8
UBE2NP61088 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2NP61088 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBE2NP61088 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UBE2NP61088 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.05■□□□□ 0.8
UBE2NP61088 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.04■□□□□ 0.8
UBE2NP61088 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2NP61088 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
UBE2NP61088 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.03■□□□□ 0.8
UBE2NP61088 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2NP61088 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2NP61088 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2NP61088 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2NP61088 LINC01124-201ENST00000409786 2117 ntBASIC20.03■□□□□ 0.8
UBE2NP61088 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2NP61088 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE2NP61088 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2NP61088 AC141586.4-201ENST00000624558 1573 ntBASIC20.02■□□□□ 0.8
UBE2NP61088 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2NP61088 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2NP61088 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
UBE2NP61088 AC005703.6-201ENST00000623265 1329 ntBASIC20.02■□□□□ 0.79
UBE2NP61088 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.01■□□□□ 0.79
UBE2NP61088 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2NP61088 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBE2NP61088 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2NP61088 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UBE2NP61088 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2NP61088 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2NP61088 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.01■□□□□ 0.79
UBE2NP61088 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE2NP61088 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2NP61088 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBE2NP61088 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2NP61088 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2NP61088 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2NP61088 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBE2NP61088 AL139125.2-201ENST00000623134 1869 ntBASIC20.01■□□□□ 0.79
UBE2NP61088 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2NP61088 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2NP61088 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2NP61088 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20■□□□□ 0.79
UBE2NP61088 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20■□□□□ 0.79
UBE2NP61088 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20■□□□□ 0.79
UBE2NP61088 AL356740.2-201ENST00000601559 647 ntBASIC20■□□□□ 0.79
UBE2NP61088 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2NP61088 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2NP61088 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2NP61088 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2NP61088 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2NP61088 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE2NP61088 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE2NP61088 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms