Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC092666.2-201ENST00000613287 246 ntBASIC25.63■■□□□ 1.69
CPT1AP50416 RASA4CP-201ENST00000424092 1398 ntBASIC25.63■■□□□ 1.69
CPT1AP50416 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CPT1AP50416 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPT1AP50416 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CPT1AP50416 AC241377.3-202ENST00000626088 1088 ntBASIC25.62■■□□□ 1.69
CPT1AP50416 AC241585.3-202ENST00000628937 1088 ntBASIC25.62■■□□□ 1.69
CPT1AP50416 AC245100.8-202ENST00000629247 1058 ntBASIC25.62■■□□□ 1.69
CPT1AP50416 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPT1AP50416 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CPT1AP50416 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CPT1AP50416 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.61■■□□□ 1.69
CPT1AP50416 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.61■■□□□ 1.69
CPT1AP50416 CA15P2-201ENST00000611168 834 ntBASIC25.61■■□□□ 1.69
CPT1AP50416 C17orf82-201ENST00000623772 1530 ntBASIC25.61■■□□□ 1.69
CPT1AP50416 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CPT1AP50416 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.6■■□□□ 1.69
CPT1AP50416 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.6■■□□□ 1.69
CPT1AP50416 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPT1AP50416 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.59■■□□□ 1.69
CPT1AP50416 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.59■■□□□ 1.69
CPT1AP50416 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.59■■□□□ 1.69
CPT1AP50416 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CPT1AP50416 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPT1AP50416 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPT1AP50416 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPT1AP50416 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPT1AP50416 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPT1AP50416 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPT1AP50416 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPT1AP50416 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
CPT1AP50416 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CPT1AP50416 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.57■■□□□ 1.68
CPT1AP50416 AC104564.3-201ENST00000582367 638 ntBASIC25.57■■□□□ 1.68
CPT1AP50416 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CPT1AP50416 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CPT1AP50416 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 AC145676.1-201ENST00000514988 2004 ntBASIC25.56■■□□□ 1.68
CPT1AP50416 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.56■■□□□ 1.68
CPT1AP50416 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.56■■□□□ 1.68
CPT1AP50416 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.56■■□□□ 1.68
CPT1AP50416 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.56■■□□□ 1.68
CPT1AP50416 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CPT1AP50416 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.56■■□□□ 1.68
CPT1AP50416 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPT1AP50416 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CPT1AP50416 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 AL161729.1-201ENST00000604104 1402 ntBASIC25.55■■□□□ 1.68
CPT1AP50416 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.55■■□□□ 1.68
CPT1AP50416 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.55■■□□□ 1.68
CPT1AP50416 AC008764.7-201ENST00000593779 1081 ntBASIC25.55■■□□□ 1.68
CPT1AP50416 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.55■■□□□ 1.68
CPT1AP50416 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CPT1AP50416 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.54■■□□□ 1.68
CPT1AP50416 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CPT1AP50416 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.54■■□□□ 1.68
CPT1AP50416 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CPT1AP50416 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.54■■□□□ 1.68
CPT1AP50416 MIR6821-201ENST00000617625 74 ntBASIC25.54■■□□□ 1.68
CPT1AP50416 AC136469.2-201ENST00000623944 1028 ntBASIC25.54■■□□□ 1.68
CPT1AP50416 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.54■■□□□ 1.68
CPT1AP50416 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CPT1AP50416 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CPT1AP50416 AC091060.1-201ENST00000623524 1766 ntBASIC25.54■■□□□ 1.68
CPT1AP50416 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CPT1AP50416 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.53■■□□□ 1.68
CPT1AP50416 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CPT1AP50416 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CPT1AP50416 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.53■■□□□ 1.68
CPT1AP50416 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CPT1AP50416 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CPT1AP50416 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.52■■□□□ 1.68
CPT1AP50416 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
CPT1AP50416 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPT1AP50416 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CPT1AP50416 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPT1AP50416 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CPT1AP50416 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPT1AP50416 AC099791.1-201ENST00000416440 715 ntBASIC25.52■■□□□ 1.68
CPT1AP50416 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.52■■□□□ 1.68
CPT1AP50416 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms