Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHATP28329 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHATP28329 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.41■□□□□ 0.7
CHATP28329 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 AL592295.1-201ENST00000400984 884 ntBASIC19.41■□□□□ 0.7
CHATP28329 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.41■□□□□ 0.7
CHATP28329 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.41■□□□□ 0.7
CHATP28329 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CHATP28329 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.41■□□□□ 0.7
CHATP28329 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.41■□□□□ 0.7
CHATP28329 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHATP28329 CLDN5-201ENST00000403084 2357 ntBASIC19.41■□□□□ 0.7
CHATP28329 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHATP28329 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHATP28329 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHATP28329 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
CHATP28329 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.4■□□□□ 0.7
CHATP28329 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.4■□□□□ 0.7
CHATP28329 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.4■□□□□ 0.7
CHATP28329 C9orf163-202ENST00000624034 2573 ntBASIC19.4■□□□□ 0.7
CHATP28329 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHATP28329 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHATP28329 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 AL161729.1-201ENST00000604104 1402 ntBASIC19.4■□□□□ 0.7
CHATP28329 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHATP28329 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHATP28329 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.4■□□□□ 0.7
CHATP28329 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHATP28329 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.39■□□□□ 0.7
CHATP28329 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHATP28329 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.39■□□□□ 0.69
CHATP28329 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHATP28329 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHATP28329 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHATP28329 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHATP28329 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CHATP28329 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.38■□□□□ 0.69
CHATP28329 MIR6765-201ENST00000614092 87 ntBASIC19.38■□□□□ 0.69
CHATP28329 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHATP28329 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHATP28329 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.37■□□□□ 0.69
CHATP28329 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CHATP28329 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.37■□□□□ 0.69
CHATP28329 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CHATP28329 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHATP28329 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHATP28329 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
CHATP28329 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHATP28329 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHATP28329 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.36■□□□□ 0.69
CHATP28329 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CHATP28329 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.36■□□□□ 0.69
CHATP28329 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.36■□□□□ 0.69
CHATP28329 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHATP28329 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHATP28329 DUX4L9-201ENST00000449051 1259 ntBASIC19.36■□□□□ 0.69
CHATP28329 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHATP28329 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.36■□□□□ 0.69
CHATP28329 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.36■□□□□ 0.69
CHATP28329 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHATP28329 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHATP28329 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHATP28329 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHATP28329 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
CHATP28329 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHATP28329 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHATP28329 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.35■□□□□ 0.69
CHATP28329 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHATP28329 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHATP28329 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.35■□□□□ 0.69
CHATP28329 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHATP28329 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHATP28329 ANOS2P-203ENST00000472227 1816 ntBASIC19.35■□□□□ 0.69
CHATP28329 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHATP28329 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.34■□□□□ 0.69
CHATP28329 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHATP28329 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms