Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20■□□□□ 0.79
UBCP0CG48 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBCP0CG48 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20■□□□□ 0.79
UBCP0CG48 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UBCP0CG48 DUX4L9-201ENST00000449051 1259 ntBASIC20■□□□□ 0.79
UBCP0CG48 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBCP0CG48 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBCP0CG48 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20■□□□□ 0.79
UBCP0CG48 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.99■□□□□ 0.79
UBCP0CG48 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.99■□□□□ 0.79
UBCP0CG48 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBCP0CG48 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBCP0CG48 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
UBCP0CG48 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.99■□□□□ 0.79
UBCP0CG48 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBCP0CG48 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBCP0CG48 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBCP0CG48 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.98■□□□□ 0.79
UBCP0CG48 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.98■□□□□ 0.79
UBCP0CG48 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.98■□□□□ 0.79
UBCP0CG48 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBCP0CG48 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBCP0CG48 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBCP0CG48 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.98■□□□□ 0.79
UBCP0CG48 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBCP0CG48 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBCP0CG48 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.97■□□□□ 0.79
UBCP0CG48 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBCP0CG48 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.97■□□□□ 0.79
UBCP0CG48 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
UBCP0CG48 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.97■□□□□ 0.79
UBCP0CG48 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
UBCP0CG48 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.97■□□□□ 0.79
UBCP0CG48 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBCP0CG48 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBCP0CG48 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBCP0CG48 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBCP0CG48 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UBCP0CG48 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBCP0CG48 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBCP0CG48 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
UBCP0CG48 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.96■□□□□ 0.79
UBCP0CG48 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBCP0CG48 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBCP0CG48 AL022069.1-201ENST00000568025 1636 ntBASIC19.95■□□□□ 0.78
UBCP0CG48 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBCP0CG48 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.95■□□□□ 0.78
UBCP0CG48 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.95■□□□□ 0.78
UBCP0CG48 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBCP0CG48 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.95■□□□□ 0.78
UBCP0CG48 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBCP0CG48 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.95■□□□□ 0.78
UBCP0CG48 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBCP0CG48 ANOS2P-203ENST00000472227 1816 ntBASIC19.95■□□□□ 0.78
UBCP0CG48 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBCP0CG48 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBCP0CG48 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBCP0CG48 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.94■□□□□ 0.78
UBCP0CG48 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.94■□□□□ 0.78
UBCP0CG48 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBCP0CG48 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBCP0CG48 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.94■□□□□ 0.78
UBCP0CG48 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
UBCP0CG48 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.94■□□□□ 0.78
UBCP0CG48 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBCP0CG48 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UBCP0CG48 RARRES2P2-201ENST00000394842 485 ntBASIC19.94■□□□□ 0.78
UBCP0CG48 LONRF2P2-201ENST00000439212 571 ntBASIC19.94■□□□□ 0.78
UBCP0CG48 AC011551.1-201ENST00000614101 683 ntBASIC19.94■□□□□ 0.78
UBCP0CG48 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.93■□□□□ 0.78
UBCP0CG48 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBCP0CG48 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
UBCP0CG48 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.93■□□□□ 0.78
UBCP0CG48 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBCP0CG48 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBCP0CG48 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBCP0CG48 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBCP0CG48 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.92■□□□□ 0.78
UBCP0CG48 AC092068.2-201ENST00000590491 1708 ntBASIC19.92■□□□□ 0.78
UBCP0CG48 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBCP0CG48 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBCP0CG48 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBCP0CG48 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.91■□□□□ 0.78
UBCP0CG48 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBCP0CG48 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms