Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HOXC6P09630 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
HOXC6P09630 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.13■■□□□ 1.77
HOXC6P09630 IRS3P-201ENST00000223076 1006 ntBASIC26.13■■□□□ 1.77
HOXC6P09630 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.13■■□□□ 1.77
HOXC6P09630 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.13■■□□□ 1.77
HOXC6P09630 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HOXC6P09630 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.13■■□□□ 1.77
HOXC6P09630 C17orf82-201ENST00000623772 1530 ntBASIC26.13■■□□□ 1.77
HOXC6P09630 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.12■■□□□ 1.77
HOXC6P09630 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.12■■□□□ 1.77
HOXC6P09630 AC008764.7-201ENST00000593779 1081 ntBASIC26.12■■□□□ 1.77
HOXC6P09630 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HOXC6P09630 AC136469.2-201ENST00000623944 1028 ntBASIC26.12■■□□□ 1.77
HOXC6P09630 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.12■■□□□ 1.77
HOXC6P09630 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.11■■□□□ 1.77
HOXC6P09630 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
HOXC6P09630 AC099791.1-201ENST00000416440 715 ntBASIC26.11■■□□□ 1.77
HOXC6P09630 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.11■■□□□ 1.77
HOXC6P09630 AC241377.3-202ENST00000626088 1088 ntBASIC26.11■■□□□ 1.77
HOXC6P09630 AC241585.3-202ENST00000628937 1088 ntBASIC26.11■■□□□ 1.77
HOXC6P09630 AC245100.8-202ENST00000629247 1058 ntBASIC26.11■■□□□ 1.77
HOXC6P09630 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HOXC6P09630 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
HOXC6P09630 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
HOXC6P09630 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
HOXC6P09630 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HOXC6P09630 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.1■■□□□ 1.77
HOXC6P09630 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
HOXC6P09630 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.1■■□□□ 1.77
HOXC6P09630 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
HOXC6P09630 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
HOXC6P09630 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.09■■□□□ 1.77
HOXC6P09630 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
HOXC6P09630 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HOXC6P09630 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
HOXC6P09630 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
HOXC6P09630 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.08■■□□□ 1.77
HOXC6P09630 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.08■■□□□ 1.77
HOXC6P09630 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.08■■□□□ 1.77
HOXC6P09630 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.08■■□□□ 1.77
HOXC6P09630 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
HOXC6P09630 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HOXC6P09630 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.07■■□□□ 1.76
HOXC6P09630 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.07■■□□□ 1.76
HOXC6P09630 MIR6089-201ENST00000616698 64 ntBASIC26.07■■□□□ 1.76
HOXC6P09630 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
HOXC6P09630 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
HOXC6P09630 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.07■■□□□ 1.76
HOXC6P09630 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HOXC6P09630 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
HOXC6P09630 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HOXC6P09630 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.06■■□□□ 1.76
HOXC6P09630 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
HOXC6P09630 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.06■■□□□ 1.76
HOXC6P09630 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.06■■□□□ 1.76
HOXC6P09630 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.06■■□□□ 1.76
HOXC6P09630 AC092803.2-201ENST00000564287 1899 ntBASIC26.06■■□□□ 1.76
HOXC6P09630 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
HOXC6P09630 AL022069.1-201ENST00000568025 1636 ntBASIC26.06■■□□□ 1.76
HOXC6P09630 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.05■■□□□ 1.76
HOXC6P09630 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
HOXC6P09630 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
HOXC6P09630 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
HOXC6P09630 SLC6A10P-202ENST00000431994 2058 ntBASIC26.05■■□□□ 1.76
HOXC6P09630 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HOXC6P09630 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
HOXC6P09630 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
HOXC6P09630 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HOXC6P09630 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HOXC6P09630 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HOXC6P09630 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HOXC6P09630 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.04■■□□□ 1.76
HOXC6P09630 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.04■■□□□ 1.76
HOXC6P09630 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
HOXC6P09630 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
HOXC6P09630 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.04■■□□□ 1.76
HOXC6P09630 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
HOXC6P09630 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
HOXC6P09630 AC233992.3-201ENST00000607491 485 ntBASIC26.03■■□□□ 1.76
HOXC6P09630 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.03■■□□□ 1.76
HOXC6P09630 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HOXC6P09630 BX842568.3-201ENST00000418104 571 ntBASIC26.02■■□□□ 1.76
HOXC6P09630 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.02■■□□□ 1.76
HOXC6P09630 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HOXC6P09630 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HOXC6P09630 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
HOXC6P09630 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HOXC6P09630 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
HOXC6P09630 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.01■■□□□ 1.75
HOXC6P09630 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
HOXC6P09630 AC091060.1-201ENST00000623524 1766 ntBASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms