Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL4A2P08572 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
COL4A2P08572 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.47■■□□□ 1.35
COL4A2P08572 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL4A2P08572 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL4A2P08572 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.47■■□□□ 1.35
COL4A2P08572 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.47■■□□□ 1.35
COL4A2P08572 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL4A2P08572 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL4A2P08572 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.46■■□□□ 1.35
COL4A2P08572 AC008764.7-201ENST00000593779 1081 ntBASIC23.46■■□□□ 1.35
COL4A2P08572 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.46■■□□□ 1.35
COL4A2P08572 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL4A2P08572 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.46■■□□□ 1.35
COL4A2P08572 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
COL4A2P08572 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL4A2P08572 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
COL4A2P08572 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL4A2P08572 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL4A2P08572 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
COL4A2P08572 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.45■■□□□ 1.34
COL4A2P08572 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL4A2P08572 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL4A2P08572 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL4A2P08572 IRS3P-201ENST00000223076 1006 ntBASIC23.44■■□□□ 1.34
COL4A2P08572 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL4A2P08572 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
COL4A2P08572 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.43■■□□□ 1.34
COL4A2P08572 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.43■■□□□ 1.34
COL4A2P08572 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.43■■□□□ 1.34
COL4A2P08572 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.43■■□□□ 1.34
COL4A2P08572 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL4A2P08572 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
COL4A2P08572 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL4A2P08572 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.43■■□□□ 1.34
COL4A2P08572 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.42■■□□□ 1.34
COL4A2P08572 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL4A2P08572 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.42■■□□□ 1.34
COL4A2P08572 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.42■■□□□ 1.34
COL4A2P08572 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL4A2P08572 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL4A2P08572 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
COL4A2P08572 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL4A2P08572 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.42■■□□□ 1.34
COL4A2P08572 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL4A2P08572 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.41■■□□□ 1.34
COL4A2P08572 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL4A2P08572 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL4A2P08572 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL4A2P08572 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.41■■□□□ 1.34
COL4A2P08572 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.41■■□□□ 1.34
COL4A2P08572 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.41■■□□□ 1.34
COL4A2P08572 AC241377.3-202ENST00000626088 1088 ntBASIC23.41■■□□□ 1.34
COL4A2P08572 AC241585.3-202ENST00000628937 1088 ntBASIC23.41■■□□□ 1.34
COL4A2P08572 AC245100.8-202ENST00000629247 1058 ntBASIC23.41■■□□□ 1.34
COL4A2P08572 AL031602.1-201ENST00000633169 911 ntBASIC23.41■■□□□ 1.34
COL4A2P08572 SLC6A10P-202ENST00000431994 2058 ntBASIC23.41■■□□□ 1.34
COL4A2P08572 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL4A2P08572 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL4A2P08572 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.4■■□□□ 1.34
COL4A2P08572 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.39■■□□□ 1.34
COL4A2P08572 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL4A2P08572 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
COL4A2P08572 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL4A2P08572 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.39■■□□□ 1.33
COL4A2P08572 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.39■■□□□ 1.33
COL4A2P08572 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL4A2P08572 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL4A2P08572 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.38■■□□□ 1.33
COL4A2P08572 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL4A2P08572 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.38■■□□□ 1.33
COL4A2P08572 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
COL4A2P08572 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.38■■□□□ 1.33
COL4A2P08572 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL4A2P08572 BX842568.3-201ENST00000418104 571 ntBASIC23.37■■□□□ 1.33
COL4A2P08572 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.37■■□□□ 1.33
COL4A2P08572 KRT18P5-201ENST00000436075 1291 ntBASIC23.37■■□□□ 1.33
COL4A2P08572 SLC47A1P1-202ENST00000449666 945 ntBASIC23.37■■□□□ 1.33
COL4A2P08572 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL4A2P08572 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
COL4A2P08572 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL4A2P08572 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL4A2P08572 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL4A2P08572 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.37■■□□□ 1.33
COL4A2P08572 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.37■■□□□ 1.33
COL4A2P08572 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.36■■□□□ 1.33
COL4A2P08572 IKBKGP1-201ENST00000612193 1073 ntBASIC23.36■■□□□ 1.33
COL4A2P08572 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
COL4A2P08572 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.36■■□□□ 1.33
COL4A2P08572 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL4A2P08572 AC034268.1-201ENST00000441047 882 ntBASIC23.36■■□□□ 1.33
COL4A2P08572 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.36■■□□□ 1.33
COL4A2P08572 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.36■■□□□ 1.33
COL4A2P08572 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.36■■□□□ 1.33
COL4A2P08572 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.36■■□□□ 1.33
COL4A2P08572 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL4A2P08572 AC027612.3-201ENST00000413684 1047 ntBASIC23.35■■□□□ 1.33
COL4A2P08572 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.35■■□□□ 1.33
COL4A2P08572 AC233992.3-201ENST00000607491 485 ntBASIC23.35■■□□□ 1.33
COL4A2P08572 AL022069.1-201ENST00000568025 1636 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms