Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.47■■■□□ 2.47
NEFMP07197 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.47■■■□□ 2.47
NEFMP07197 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.47■■■□□ 2.47
NEFMP07197 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NEFMP07197 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.47■■■□□ 2.47
NEFMP07197 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NEFMP07197 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NEFMP07197 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NEFMP07197 AL161729.1-201ENST00000604104 1402 ntBASIC30.46■■■□□ 2.47
NEFMP07197 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NEFMP07197 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
NEFMP07197 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NEFMP07197 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
NEFMP07197 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEFMP07197 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC30.44■■■□□ 2.46
NEFMP07197 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NEFMP07197 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.44■■■□□ 2.46
NEFMP07197 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEFMP07197 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEFMP07197 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.44■■■□□ 2.46
NEFMP07197 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
NEFMP07197 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
NEFMP07197 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.43■■■□□ 2.46
NEFMP07197 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
NEFMP07197 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NEFMP07197 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
NEFMP07197 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NEFMP07197 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.42■■■□□ 2.46
NEFMP07197 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.42■■■□□ 2.46
NEFMP07197 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
NEFMP07197 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NEFMP07197 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
NEFMP07197 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.41■■■□□ 2.46
NEFMP07197 AL356740.2-201ENST00000601559 647 ntBASIC30.41■■■□□ 2.46
NEFMP07197 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
NEFMP07197 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
NEFMP07197 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
NEFMP07197 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.4■■■□□ 2.46
NEFMP07197 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.4■■■□□ 2.46
NEFMP07197 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.4■■■□□ 2.46
NEFMP07197 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.4■■■□□ 2.46
NEFMP07197 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NEFMP07197 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
NEFMP07197 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.4■■■□□ 2.46
NEFMP07197 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NEFMP07197 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.4■■■□□ 2.46
NEFMP07197 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEFMP07197 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEFMP07197 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEFMP07197 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.39■■■□□ 2.46
NEFMP07197 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.39■■■□□ 2.46
NEFMP07197 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEFMP07197 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
NEFMP07197 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
NEFMP07197 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.38■■■□□ 2.45
NEFMP07197 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NEFMP07197 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.38■■■□□ 2.45
NEFMP07197 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.38■■■□□ 2.45
NEFMP07197 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NEFMP07197 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
NEFMP07197 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
NEFMP07197 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
NEFMP07197 AL117332.1-201ENST00000622628 974 ntBASIC30.37■■■□□ 2.45
NEFMP07197 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.37■■■□□ 2.45
NEFMP07197 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.37■■■□□ 2.45
NEFMP07197 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
NEFMP07197 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.37■■■□□ 2.45
NEFMP07197 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.37■■■□□ 2.45
NEFMP07197 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NEFMP07197 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NEFMP07197 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
NEFMP07197 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NEFMP07197 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.36■■■□□ 2.45
NEFMP07197 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NEFMP07197 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.36■■■□□ 2.45
NEFMP07197 AC005703.6-201ENST00000623265 1329 ntBASIC30.36■■■□□ 2.45
NEFMP07197 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NEFMP07197 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NEFMP07197 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.36■■■□□ 2.45
NEFMP07197 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.35■■■□□ 2.45
NEFMP07197 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
NEFMP07197 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
NEFMP07197 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NEFMP07197 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
NEFMP07197 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NEFMP07197 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NEFMP07197 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NEFMP07197 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.34■■■□□ 2.45
NEFMP07197 MIR3621-201ENST00000580529 85 ntBASIC30.34■■■□□ 2.45
NEFMP07197 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
NEFMP07197 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.33■■■□□ 2.45
NEFMP07197 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NEFMP07197 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.33■■■□□ 2.45
NEFMP07197 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.33■■■□□ 2.45
NEFMP07197 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.33■■■□□ 2.45
NEFMP07197 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NEFMP07197 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NEFMP07197 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.32■■■□□ 2.44
NEFMP07197 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.32■■■□□ 2.44
NEFMP07197 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms