Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
IFNA1P01562 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFNA1P01562 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.11■□□□□ 0.49
IFNA1P01562 C1orf229-201ENST00000623686 2258 ntBASIC18.11■□□□□ 0.49
IFNA1P01562 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
IFNA1P01562 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.11■□□□□ 0.49
IFNA1P01562 AL359504.2-201ENST00000605506 1601 ntBASIC18.11■□□□□ 0.49
IFNA1P01562 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFNA1P01562 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IFNA1P01562 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.1■□□□□ 0.49
IFNA1P01562 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.1■□□□□ 0.49
IFNA1P01562 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFNA1P01562 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IFNA1P01562 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.09■□□□□ 0.49
IFNA1P01562 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IFNA1P01562 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
IFNA1P01562 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFNA1P01562 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IFNA1P01562 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IFNA1P01562 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFNA1P01562 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IFNA1P01562 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.08■□□□□ 0.49
IFNA1P01562 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IFNA1P01562 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IFNA1P01562 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IFNA1P01562 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.08■□□□□ 0.49
IFNA1P01562 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.08■□□□□ 0.49
IFNA1P01562 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFNA1P01562 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IFNA1P01562 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFNA1P01562 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFNA1P01562 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFNA1P01562 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 HLA-L-211ENST00000482052 1765 ntBASIC18.07■□□□□ 0.48
IFNA1P01562 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IFNA1P01562 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IFNA1P01562 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IFNA1P01562 FOXO3B-201ENST00000395675 1928 ntBASIC18.07■□□□□ 0.48
IFNA1P01562 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFNA1P01562 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFNA1P01562 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.06■□□□□ 0.48
IFNA1P01562 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFNA1P01562 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IFNA1P01562 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
IFNA1P01562 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.06■□□□□ 0.48
IFNA1P01562 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IFNA1P01562 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFNA1P01562 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFNA1P01562 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
IFNA1P01562 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFNA1P01562 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
IFNA1P01562 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IFNA1P01562 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFNA1P01562 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFNA1P01562 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFNA1P01562 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
IFNA1P01562 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.04■□□□□ 0.48
IFNA1P01562 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
IFNA1P01562 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.04■□□□□ 0.48
IFNA1P01562 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.04■□□□□ 0.48
IFNA1P01562 AC136428.2-201ENST00000563187 214 ntBASIC18.04■□□□□ 0.48
IFNA1P01562 AC097358.2-201ENST00000607541 1159 ntBASIC18.04■□□□□ 0.48
IFNA1P01562 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 ANOS2P-203ENST00000472227 1816 ntBASIC18.04■□□□□ 0.48
IFNA1P01562 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.04■□□□□ 0.48
IFNA1P01562 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFNA1P01562 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IFNA1P01562 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms