Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NGFP01138 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NGFP01138 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.81■□□□□ 0.76
NGFP01138 SNX5-217ENST00000606557 1087 ntBASIC19.81■□□□□ 0.76
NGFP01138 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.81■□□□□ 0.76
NGFP01138 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.81■□□□□ 0.76
NGFP01138 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.81■□□□□ 0.76
NGFP01138 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NGFP01138 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.8■□□□□ 0.76
NGFP01138 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NGFP01138 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.8■□□□□ 0.76
NGFP01138 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NGFP01138 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NGFP01138 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.8■□□□□ 0.76
NGFP01138 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.8■□□□□ 0.76
NGFP01138 AC092028.1-203ENST00000608262 953 ntBASIC19.8■□□□□ 0.76
NGFP01138 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
NGFP01138 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NGFP01138 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NGFP01138 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NGFP01138 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NGFP01138 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NGFP01138 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.79■□□□□ 0.76
NGFP01138 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NGFP01138 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.79■□□□□ 0.76
NGFP01138 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NGFP01138 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.78■□□□□ 0.76
NGFP01138 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NGFP01138 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.78■□□□□ 0.76
NGFP01138 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.78■□□□□ 0.76
NGFP01138 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.78■□□□□ 0.76
NGFP01138 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NGFP01138 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NGFP01138 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NGFP01138 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.77■□□□□ 0.76
NGFP01138 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.77■□□□□ 0.76
NGFP01138 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.77■□□□□ 0.76
NGFP01138 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NGFP01138 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NGFP01138 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NGFP01138 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NGFP01138 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NGFP01138 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.76■□□□□ 0.75
NGFP01138 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NGFP01138 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.76■□□□□ 0.75
NGFP01138 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.76■□□□□ 0.75
NGFP01138 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NGFP01138 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.75■□□□□ 0.75
NGFP01138 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NGFP01138 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NGFP01138 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NGFP01138 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NGFP01138 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NGFP01138 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.75■□□□□ 0.75
NGFP01138 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
NGFP01138 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.75■□□□□ 0.75
NGFP01138 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.75■□□□□ 0.75
NGFP01138 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.75■□□□□ 0.75
NGFP01138 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.75■□□□□ 0.75
NGFP01138 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NGFP01138 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
NGFP01138 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.75■□□□□ 0.75
NGFP01138 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.74■□□□□ 0.75
NGFP01138 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NGFP01138 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NGFP01138 TSPY9P-201ENST00000440215 945 ntBASIC19.74■□□□□ 0.75
NGFP01138 TSPY11P-201ENST00000442607 1045 ntBASIC19.74■□□□□ 0.75
NGFP01138 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.74■□□□□ 0.75
NGFP01138 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.74■□□□□ 0.75
NGFP01138 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms