Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.36■□□□□ 0.85
CDRT1O95170 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.35■□□□□ 0.85
CDRT1O95170 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDRT1O95170 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.34■□□□□ 0.85
CDRT1O95170 ANOS2P-203ENST00000472227 1816 ntBASIC20.34■□□□□ 0.85
CDRT1O95170 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.34■□□□□ 0.85
CDRT1O95170 GUSBP5-202ENST00000510805 1989 ntBASIC20.34■□□□□ 0.85
CDRT1O95170 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.34■□□□□ 0.85
CDRT1O95170 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 AL157400.5-201ENST00000507624 621 ntBASIC20.34■□□□□ 0.85
CDRT1O95170 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDRT1O95170 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.34■□□□□ 0.85
CDRT1O95170 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.33■□□□□ 0.85
CDRT1O95170 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CDRT1O95170 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDRT1O95170 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDRT1O95170 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDRT1O95170 AC127496.7-201ENST00000625110 1798 ntBASIC20.33■□□□□ 0.84
CDRT1O95170 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.33■□□□□ 0.84
CDRT1O95170 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDRT1O95170 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDRT1O95170 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.32■□□□□ 0.84
CDRT1O95170 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 AC137767.1-201ENST00000602918 1920 ntBASIC20.32■□□□□ 0.84
CDRT1O95170 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.32■□□□□ 0.84
CDRT1O95170 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDRT1O95170 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDRT1O95170 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CDRT1O95170 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDRT1O95170 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDRT1O95170 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CDRT1O95170 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDRT1O95170 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDRT1O95170 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.31■□□□□ 0.84
CDRT1O95170 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDRT1O95170 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.3■□□□□ 0.84
CDRT1O95170 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.3■□□□□ 0.84
CDRT1O95170 AC060814.1-201ENST00000554326 538 ntBASIC20.3■□□□□ 0.84
CDRT1O95170 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 AL024507.2-201ENST00000606070 2574 ntBASIC20.3■□□□□ 0.84
CDRT1O95170 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDRT1O95170 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDRT1O95170 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDRT1O95170 DUSP8P3-201ENST00000399571 1760 ntBASIC20.29■□□□□ 0.84
CDRT1O95170 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.29■□□□□ 0.84
CDRT1O95170 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
CDRT1O95170 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.29■□□□□ 0.84
CDRT1O95170 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDRT1O95170 AC025884.2-201ENST00000553429 711 ntBASIC20.29■□□□□ 0.84
CDRT1O95170 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDRT1O95170 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.29■□□□□ 0.84
CDRT1O95170 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDRT1O95170 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDRT1O95170 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDRT1O95170 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDRT1O95170 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.28■□□□□ 0.84
CDRT1O95170 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CDRT1O95170 AC007375.3-201ENST00000600936 2314 ntBASIC20.28■□□□□ 0.84
CDRT1O95170 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.28■□□□□ 0.84
CDRT1O95170 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.28■□□□□ 0.84
CDRT1O95170 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CDRT1O95170 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDRT1O95170 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDRT1O95170 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDRT1O95170 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.27■□□□□ 0.84
CDRT1O95170 ECEL1P1-201ENST00000373592 1742 ntBASIC20.27■□□□□ 0.83
CDRT1O95170 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms