Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
NDUFS3O75489 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
NDUFS3O75489 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NDUFS3O75489 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.77■■□□□ 1.24
NDUFS3O75489 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
NDUFS3O75489 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
NDUFS3O75489 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
NDUFS3O75489 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDUFS3O75489 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDUFS3O75489 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDUFS3O75489 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.76■■□□□ 1.23
NDUFS3O75489 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDUFS3O75489 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDUFS3O75489 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDUFS3O75489 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.75■■□□□ 1.23
NDUFS3O75489 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NDUFS3O75489 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDUFS3O75489 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
NDUFS3O75489 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDUFS3O75489 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.75■■□□□ 1.23
NDUFS3O75489 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDUFS3O75489 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.74■■□□□ 1.23
NDUFS3O75489 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.74■■□□□ 1.23
NDUFS3O75489 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.74■■□□□ 1.23
NDUFS3O75489 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.74■■□□□ 1.23
NDUFS3O75489 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDUFS3O75489 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NDUFS3O75489 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDUFS3O75489 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.73■■□□□ 1.23
NDUFS3O75489 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.73■■□□□ 1.23
NDUFS3O75489 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDUFS3O75489 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDUFS3O75489 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.73■■□□□ 1.23
NDUFS3O75489 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.73■■□□□ 1.23
NDUFS3O75489 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.73■■□□□ 1.23
NDUFS3O75489 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDUFS3O75489 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
NDUFS3O75489 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDUFS3O75489 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
NDUFS3O75489 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NDUFS3O75489 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.72■■□□□ 1.23
NDUFS3O75489 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
NDUFS3O75489 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDUFS3O75489 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NDUFS3O75489 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.72■■□□□ 1.23
NDUFS3O75489 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NDUFS3O75489 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
NDUFS3O75489 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
NDUFS3O75489 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.71■■□□□ 1.23
NDUFS3O75489 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
NDUFS3O75489 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
NDUFS3O75489 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
NDUFS3O75489 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
NDUFS3O75489 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.71■■□□□ 1.23
NDUFS3O75489 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NDUFS3O75489 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NDUFS3O75489 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NDUFS3O75489 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.71■■□□□ 1.23
NDUFS3O75489 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
NDUFS3O75489 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.7■■□□□ 1.22
NDUFS3O75489 AC137630.3-201ENST00000607245 391 ntBASIC22.7■■□□□ 1.22
NDUFS3O75489 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NDUFS3O75489 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NDUFS3O75489 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NDUFS3O75489 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NDUFS3O75489 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NDUFS3O75489 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NDUFS3O75489 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NDUFS3O75489 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NDUFS3O75489 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NDUFS3O75489 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NDUFS3O75489 ALDH1A3-203ENST00000557963 1670 ntBASIC22.69■■□□□ 1.22
NDUFS3O75489 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.69■■□□□ 1.22
NDUFS3O75489 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NDUFS3O75489 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.69■■□□□ 1.22
NDUFS3O75489 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.69■■□□□ 1.22
NDUFS3O75489 AC004448.1-201ENST00000458332 883 ntBASIC22.69■■□□□ 1.22
NDUFS3O75489 RARRES2P1-201ENST00000474487 481 ntBASIC22.69■■□□□ 1.22
NDUFS3O75489 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
NDUFS3O75489 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.69■■□□□ 1.22
NDUFS3O75489 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NDUFS3O75489 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NDUFS3O75489 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.68■■□□□ 1.22
NDUFS3O75489 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.68■■□□□ 1.22
NDUFS3O75489 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
NDUFS3O75489 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.68■■□□□ 1.22
NDUFS3O75489 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NDUFS3O75489 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NDUFS3O75489 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.67■■□□□ 1.22
NDUFS3O75489 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NDUFS3O75489 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NDUFS3O75489 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NDUFS3O75489 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NDUFS3O75489 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms