Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.515e-7■□□□□ 9.8
EIF3DO15371 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.045e-7■□□□□ 9.8
EIF3DO15371 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.554e-13■□□□□ 9.8
EIF3DO15371 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.354e-13■□□□□ 9.8
EIF3DO15371 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.254e-13■□□□□ 9.8
EIF3DO15371 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.214e-13■□□□□ 9.8
EIF3DO15371 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.84■■■□□ 2.214e-13■□□□□ 9.8
EIF3DO15371 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.574e-13■□□□□ 9.8
EIF3DO15371 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.514e-13■□□□□ 9.8
EIF3DO15371 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.565e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.635e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.665e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.695e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.75e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-214ENST00000467200 3634 ntAPPRIS ALT2 TSL 1 (best)10.32□□□□□ -0.765e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.85e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.835e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.95e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.935e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.945e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.995e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.015e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.045e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.055e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.085e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.21□□□□□ -1.095e-7■□□□□ 9.8
EIF3DO15371 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.145e-7■□□□□ 9.8
EIF3DO15371 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.57■■■□□ 2.321e-6■□□□□ 9.8
EIF3DO15371 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.561e-6■□□□□ 9.8
EIF3DO15371 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.81■■□□□ 1.241e-6■□□□□ 9.8
EIF3DO15371 ERF-206ENST00000596818 566 ntTSL 316.96■□□□□ 0.311e-6■□□□□ 9.8
EIF3DO15371 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.631e-8■□□□□ 9.8
EIF3DO15371 CD151-210ENST00000526661 894 ntTSL 225.07■■□□□ 1.61e-8■□□□□ 9.8
EIF3DO15371 CD151-220ENST00000532045 1803 ntTSL 522.86■■□□□ 1.251e-8■□□□□ 9.8
EIF3DO15371 CD151-206ENST00000525333 561 ntTSL 421.18■□□□□ 0.981e-8■□□□□ 9.8
EIF3DO15371 CD151-216ENST00000530155 493 ntTSL 421.18■□□□□ 0.981e-8■□□□□ 9.8
EIF3DO15371 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.981e-8■□□□□ 9.8
EIF3DO15371 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.921e-8■□□□□ 9.8
EIF3DO15371 CD151-204ENST00000524748 793 ntTSL 520.14■□□□□ 0.811e-8■□□□□ 9.8
EIF3DO15371 CD151-212ENST00000527341 797 ntTSL 320.14■□□□□ 0.811e-8■□□□□ 9.8
EIF3DO15371 CD151-211ENST00000526693 771 ntTSL 319.88■□□□□ 0.771e-8■□□□□ 9.8
EIF3DO15371 CD151-214ENST00000528867 545 ntTSL 419.82■□□□□ 0.761e-8■□□□□ 9.8
EIF3DO15371 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.721e-8■□□□□ 9.8
EIF3DO15371 CD151-207ENST00000525718 565 ntTSL 219.35■□□□□ 0.691e-8■□□□□ 9.8
EIF3DO15371 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.651e-8■□□□□ 9.8
EIF3DO15371 CD151-215ENST00000529810 608 ntTSL 318.71■□□□□ 0.591e-8■□□□□ 9.8
EIF3DO15371 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.47■□□□□ 0.391e-8■□□□□ 9.8
EIF3DO15371 CD151-219ENST00000531999 580 ntTSL 317.19■□□□□ 0.341e-8■□□□□ 9.8
EIF3DO15371 CD151-208ENST00000525868 541 ntTSL 416.87■□□□□ 0.291e-8■□□□□ 9.8
EIF3DO15371 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.221e-8■□□□□ 9.8
EIF3DO15371 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.93■□□□□ 0.141e-8■□□□□ 9.8
EIF3DO15371 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.111e-8■□□□□ 9.8
EIF3DO15371 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.091e-8■□□□□ 9.8
EIF3DO15371 CD151-217ENST00000530320 648 ntTSL 315.29■□□□□ 0.041e-8■□□□□ 9.8
EIF3DO15371 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.021e-8■□□□□ 9.8
EIF3DO15371 CD151-218ENST00000530726 1407 ntTSL 514.52□□□□□ -0.081e-8■□□□□ 9.8
EIF3DO15371 BCAR1-222ENST00000569340 714 ntTSL 314.4□□□□□ -0.11e-8■□□□□ 9.8
EIF3DO15371 HUWE1-211ENST00000480438 564 ntTSL 214.29□□□□□ -0.121e-8■□□□□ 9.8
EIF3DO15371 BCAR1-211ENST00000562556 4659 ntTSL 214.02□□□□□ -0.171e-8■□□□□ 9.8
EIF3DO15371 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.31e-8■□□□□ 9.8
EIF3DO15371 CD151-209ENST00000526439 713 ntTSL 212.04□□□□□ -0.481e-8■□□□□ 9.8
EIF3DO15371 TTC3-223ENST00000492275 769 ntTSL 328.15■■■□□ 2.15e-9■□□□□ 9.8
EIF3DO15371 TTC3-212ENST00000463216 842 ntTSL 525.76■■□□□ 1.715e-9■□□□□ 9.8
EIF3DO15371 TTC3-224ENST00000494243 861 ntTSL 525.59■■□□□ 1.695e-9■□□□□ 9.8
EIF3DO15371 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)14.42□□□□□ -0.13e-11■□□□□ 9.7
EIF3DO15371 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.938e-10■□□□□ 9.7
EIF3DO15371 RBM5-212ENST00000464087 5616 ntTSL 28.69□□□□□ -1.028e-10■□□□□ 9.7
EIF3DO15371 NKD1-202ENST00000564336 477 ntTSL 324.35■■□□□ 1.491e-6■□□□□ 9.7
EIF3DO15371 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.81e-6■□□□□ 9.7
EIF3DO15371 DYNC1H1-206ENST00000555204 353 ntTSL 38.83□□□□□ -15e-9■□□□□ 9.7
EIF3DO15371 FANCA-206ENST00000561660 762 ntTSL 519.47■□□□□ 0.713e-7■□□□□ 9.7
EIF3DO15371 FANCA-201ENST00000305699 1430 ntTSL 216.81■□□□□ 0.283e-7■□□□□ 9.7
EIF3DO15371 FANCA-229ENST00000567988 915 ntTSL 513.4□□□□□ -0.263e-7■□□□□ 9.7
EIF3DO15371 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.862e-17■□□□□ 9.7
EIF3DO15371 CFL1-205ENST00000526975 567 ntTSL 320.24■□□□□ 0.832e-17■□□□□ 9.7
EIF3DO15371 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.62e-17■□□□□ 9.7
EIF3DO15371 CFL1-210ENST00000530945 1509 ntTSL 218.55■□□□□ 0.562e-17■□□□□ 9.7
EIF3DO15371 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.9■□□□□ 0.142e-17■□□□□ 9.7
EIF3DO15371 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.97□□□□□ -0.012e-17■□□□□ 9.7
EIF3DO15371 CFL1-213ENST00000532134 855 ntTSL 513.93□□□□□ -0.182e-17■□□□□ 9.7
EIF3DO15371 CFL1-207ENST00000527752 766 ntTSL 512.46□□□□□ -0.412e-17■□□□□ 9.7
EIF3DO15371 DYNLL1-208ENST00000550178 581 ntBASIC31.17■■■□□ 2.584e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.584e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.39■□□□□ 0.854e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.834e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.74e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-206ENST00000549649 794 ntTSL 319.41■□□□□ 0.74e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.09■□□□□ 0.494e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.364e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC12.7□□□□□ -0.384e-12■□□□□ 9.7
EIF3DO15371 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.784e-12■□□□□ 9.7
EIF3DO15371 NOL4L-208ENST00000475781 1127 ntTSL 518.75■□□□□ 0.598e-7■□□□□ 9.7
EIF3DO15371 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.1■□□□□ 0.498e-7■□□□□ 9.7
EIF3DO15371 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.438e-7■□□□□ 9.7
EIF3DO15371 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.98□□□□□ -0.338e-7■□□□□ 9.7
EIF3DO15371 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.664e-54■□□□□ 9.7
EIF3DO15371 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.783e-7■□□□□ 9.7
EIF3DO15371 STARD7-202ENST00000443962 742 ntTSL 520.89■□□□□ 0.935e-26■□□□□ 9.6
EIF3DO15371 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.365e-26■□□□□ 9.6
EIF3DO15371 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.2■□□□□ 0.345e-26■□□□□ 9.6
Retrieved 100 of 4,069 protein–RNA pairs in 132.6 ms