Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 MIR6089-201ENST00000616698 64 ntBASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SETD8P1-201ENST00000623146 1180 ntBASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
TMEM256-PLSCR3K7ERE1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM256-PLSCR3K7ERE1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms