Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF223E7ERA6 AC136469.2-201ENST00000623944 1028 ntBASIC19.06■□□□□ 0.64
RNF223E7ERA6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF223E7ERA6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF223E7ERA6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF223E7ERA6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF223E7ERA6 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.05■□□□□ 0.64
RNF223E7ERA6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF223E7ERA6 AC233992.3-201ENST00000607491 485 ntBASIC19.05■□□□□ 0.64
RNF223E7ERA6 AC241377.3-202ENST00000626088 1088 ntBASIC19.05■□□□□ 0.64
RNF223E7ERA6 AC241585.3-202ENST00000628937 1088 ntBASIC19.05■□□□□ 0.64
RNF223E7ERA6 AC245100.8-202ENST00000629247 1058 ntBASIC19.05■□□□□ 0.64
RNF223E7ERA6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF223E7ERA6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RNF223E7ERA6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
RNF223E7ERA6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF223E7ERA6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF223E7ERA6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF223E7ERA6 AC006455.2-201ENST00000429931 906 ntBASIC19.04■□□□□ 0.64
RNF223E7ERA6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF223E7ERA6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF223E7ERA6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
RNF223E7ERA6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF223E7ERA6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF223E7ERA6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF223E7ERA6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF223E7ERA6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF223E7ERA6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF223E7ERA6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RNF223E7ERA6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF223E7ERA6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF223E7ERA6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF223E7ERA6 C17orf82-201ENST00000623772 1530 ntBASIC19.03■□□□□ 0.64
RNF223E7ERA6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF223E7ERA6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF223E7ERA6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF223E7ERA6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF223E7ERA6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF223E7ERA6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF223E7ERA6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF223E7ERA6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF223E7ERA6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF223E7ERA6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF223E7ERA6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF223E7ERA6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF223E7ERA6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF223E7ERA6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF223E7ERA6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF223E7ERA6 AL022069.1-201ENST00000568025 1636 ntBASIC19.01■□□□□ 0.63
RNF223E7ERA6 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF223E7ERA6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF223E7ERA6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF223E7ERA6 AC090192.1-201ENST00000517740 490 ntBASIC19.01■□□□□ 0.63
RNF223E7ERA6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF223E7ERA6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RNF223E7ERA6 AC009086.3-201ENST00000623486 1008 ntBASIC19.01■□□□□ 0.63
RNF223E7ERA6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNF223E7ERA6 BX842568.3-201ENST00000418104 571 ntBASIC19■□□□□ 0.63
RNF223E7ERA6 AC034268.1-201ENST00000441047 882 ntBASIC19■□□□□ 0.63
RNF223E7ERA6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19■□□□□ 0.63
RNF223E7ERA6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19■□□□□ 0.63
RNF223E7ERA6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19■□□□□ 0.63
RNF223E7ERA6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF223E7ERA6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF223E7ERA6 MPST-208ENST00000628507 698 ntTSL 5 BASIC19■□□□□ 0.63
RNF223E7ERA6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF223E7ERA6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF223E7ERA6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF223E7ERA6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF223E7ERA6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF223E7ERA6 MIR3181-201ENST00000578512 73 ntBASIC18.99■□□□□ 0.63
RNF223E7ERA6 IKBKGP1-201ENST00000612193 1073 ntBASIC18.99■□□□□ 0.63
RNF223E7ERA6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF223E7ERA6 RARRES2P11-201ENST00000635158 484 ntBASIC18.99■□□□□ 0.63
RNF223E7ERA6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF223E7ERA6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF223E7ERA6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF223E7ERA6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF223E7ERA6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF223E7ERA6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF223E7ERA6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms