Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MSGN1A6NI15 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MSGN1A6NI15 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSGN1A6NI15 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSGN1A6NI15 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.93■□□□□ 0.62
MSGN1A6NI15 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSGN1A6NI15 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MSGN1A6NI15 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSGN1A6NI15 HSD17B1P1-201ENST00000590052 955 ntBASIC18.93■□□□□ 0.62
MSGN1A6NI15 MIR6089-201ENST00000616698 64 ntBASIC18.93■□□□□ 0.62
MSGN1A6NI15 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.93■□□□□ 0.62
MSGN1A6NI15 AC133552.2-201ENST00000619106 1032 ntBASIC18.93■□□□□ 0.62
MSGN1A6NI15 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSGN1A6NI15 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSGN1A6NI15 AC007375.3-201ENST00000600936 2314 ntBASIC18.92■□□□□ 0.62
MSGN1A6NI15 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSGN1A6NI15 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSGN1A6NI15 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSGN1A6NI15 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSGN1A6NI15 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSGN1A6NI15 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.92■□□□□ 0.62
MSGN1A6NI15 LINC00526-201ENST00000581067 1875 ntBASIC18.92■□□□□ 0.62
MSGN1A6NI15 C1orf229-201ENST00000623686 2258 ntBASIC18.91■□□□□ 0.62
MSGN1A6NI15 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.91■□□□□ 0.62
MSGN1A6NI15 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MSGN1A6NI15 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MSGN1A6NI15 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSGN1A6NI15 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.91■□□□□ 0.62
MSGN1A6NI15 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
MSGN1A6NI15 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.91■□□□□ 0.62
MSGN1A6NI15 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSGN1A6NI15 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
MSGN1A6NI15 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSGN1A6NI15 AC009831.1-201ENST00000580420 1582 ntBASIC18.9■□□□□ 0.62
MSGN1A6NI15 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSGN1A6NI15 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.9■□□□□ 0.62
MSGN1A6NI15 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MSGN1A6NI15 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MSGN1A6NI15 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MSGN1A6NI15 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
MSGN1A6NI15 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MSGN1A6NI15 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 RARRES2P2-201ENST00000394842 485 ntBASIC18.89■□□□□ 0.61
MSGN1A6NI15 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.89■□□□□ 0.61
MSGN1A6NI15 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
MSGN1A6NI15 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MSGN1A6NI15 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
MSGN1A6NI15 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.88■□□□□ 0.61
MSGN1A6NI15 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.88■□□□□ 0.61
MSGN1A6NI15 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 HLA-L-211ENST00000482052 1765 ntBASIC18.88■□□□□ 0.61
MSGN1A6NI15 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MSGN1A6NI15 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.88■□□□□ 0.61
MSGN1A6NI15 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MSGN1A6NI15 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSGN1A6NI15 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSGN1A6NI15 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSGN1A6NI15 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSGN1A6NI15 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MSGN1A6NI15 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.87■□□□□ 0.61
MSGN1A6NI15 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSGN1A6NI15 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MSGN1A6NI15 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.87■□□□□ 0.61
MSGN1A6NI15 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.87■□□□□ 0.61
MSGN1A6NI15 AC137767.1-201ENST00000602918 1920 ntBASIC18.87■□□□□ 0.61
MSGN1A6NI15 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.86■□□□□ 0.61
MSGN1A6NI15 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.86■□□□□ 0.61
MSGN1A6NI15 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MSGN1A6NI15 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.86■□□□□ 0.61
MSGN1A6NI15 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.86■□□□□ 0.61
MSGN1A6NI15 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 GUSBP5-202ENST00000510805 1989 ntBASIC18.86■□□□□ 0.61
MSGN1A6NI15 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MSGN1A6NI15 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSGN1A6NI15 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms