Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV12-1A0A0B4J245 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 SUZ12P1-203ENST00000578195 985 ntBASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 SLC25A24-204ENST00000569674 2357 ntBASIC16.06■□□□□ 0.16
TRAV12-1A0A0B4J245 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 MIR219A2-201ENST00000608502 1504 ntBASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV12-1A0A0B4J245 ESRRAP2-201ENST00000418437 1549 ntBASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 DUX4L28-201ENST00000623687 678 ntBASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 AC148477.6-201ENST00000623746 465 ntBASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV12-1A0A0B4J245 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV12-1A0A0B4J245 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 AL137060.1-201ENST00000618151 2648 ntBASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 AC008813.1-201ENST00000536597 885 ntBASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV12-1A0A0B4J245 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms