Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV25-1A0A075B6N4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 AC007029.1-201ENST00000604183 313 ntBASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV25-1A0A075B6N4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV25-1A0A075B6N4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 AC137767.1-201ENST00000602918 1920 ntBASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV25-1A0A075B6N4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV25-1A0A075B6N4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV25-1A0A075B6N4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 AC004812.2-201ENST00000611079 2094 ntBASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 MIR6089-201ENST00000616698 64 ntBASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV25-1A0A075B6N4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRBV25-1A0A075B6N4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV25-1A0A075B6N4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV25-1A0A075B6N4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms