Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 EIF5AP2-201ENST00000585668 1047 ntBASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 AL161773.1-201ENST00000624845 863 ntBASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 API5-208ENST00000531273 1868 ntTSL 2 BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHANK2Q9UPX8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 CCT8L1P-201ENST00000465400 1674 ntBASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 BAX-205ENST00000391871 687 ntTSL 5 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 AL354861.1-201ENST00000445213 355 ntBASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 TPT1P11-201ENST00000458482 498 ntBASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 NDUFB10P1-201ENST00000567319 521 ntBASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC21.56■■□□□ 1.04
SHANK2Q9UPX8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 RN7SKP109-201ENST00000410592 316 ntBASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 C2orf69P1-201ENST00000563532 1093 ntBASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 AL118516.1-201ENST00000564152 670 ntBASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SHANK2Q9UPX8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 AC215219.1-201ENST00000400706 1817 ntBASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 AC018529.2-202ENST00000611482 3087 ntBASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHANK2Q9UPX8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC21.53■■□□□ 1.04
SHANK2Q9UPX8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms