Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AC092384.3-202ENST00000564646 2873 ntBASIC17.1■□□□□ 0.33
PNMA3Q9UL41 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AP000356.3-201ENST00000382243 753 ntBASIC17.1■□□□□ 0.33
PNMA3Q9UL41 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AC079112.1-201ENST00000454972 939 ntBASIC17.1■□□□□ 0.33
PNMA3Q9UL41 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AP002803.1-201ENST00000528836 498 ntBASIC17.1■□□□□ 0.33
PNMA3Q9UL41 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 HLA-C-210ENST00000640219 976 ntBASIC17.1■□□□□ 0.33
PNMA3Q9UL41 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PNMA3Q9UL41 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AL645933.1-201ENST00000440087 609 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AC114501.1-201ENST00000445949 172 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 RBM8B-201ENST00000555532 525 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 MIR3677-201ENST00000578964 60 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AC242376.2-201ENST00000619355 883 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AC007718.1-201ENST00000621078 280 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 AC090616.6-203ENST00000579186 1945 ntBASIC17.09■□□□□ 0.33
PNMA3Q9UL41 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PNMA3Q9UL41 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PNMA3Q9UL41 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PNMA3Q9UL41 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.08■□□□□ 0.33
PNMA3Q9UL41 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PNMA3Q9UL41 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PNMA3Q9UL41 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms