Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 C2orf69P2-201ENST00000562032 1123 ntBASIC14.92□□□□□ -0.02
SPASTQ9UBP0 AP006547.1-201ENST00000563435 692 ntBASIC14.92□□□□□ -0.02
SPASTQ9UBP0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.92□□□□□ -0.02
SPASTQ9UBP0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 EIF3FP3-201ENST00000434851 1086 ntBASIC14.91□□□□□ -0.02
SPASTQ9UBP0 RPSAP36-202ENST00000494591 1261 ntBASIC14.91□□□□□ -0.02
SPASTQ9UBP0 COX5BP1-201ENST00000507622 393 ntBASIC14.91□□□□□ -0.02
SPASTQ9UBP0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 AC104982.3-201ENST00000581995 514 ntBASIC14.91□□□□□ -0.02
SPASTQ9UBP0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 AL008638.5-201ENST00000623814 1298 ntBASIC14.91□□□□□ -0.02
SPASTQ9UBP0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.91□□□□□ -0.02
SPASTQ9UBP0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms