Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AC104581.4-201ENST00000623126 3052 ntBASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.51□□□□□ -0.09
CUEDC1Q9NWM3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ANKRD19P-201ENST00000338192 862 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 POM121L8P-201ENST00000417732 1281 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 C2orf27AP3-201ENST00000434123 579 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 AC016694.1-201ENST00000434179 700 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 POM121L9P-203ENST00000441984 1285 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 KLF2P4-201ENST00000451959 1225 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 PFN1P12-201ENST00000455938 534 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 AL354718.3-201ENST00000616414 581 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CR382287.1-201ENST00000623954 586 ntBASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CUEDC1Q9NWM3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 LINC01101-201ENST00000622953 1884 ntBASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 KRT90P-201ENST00000549264 1064 ntBASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 RN7SL48P-201ENST00000579283 293 ntBASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 RN7SL190P-201ENST00000582519 257 ntBASIC14.49□□□□□ -0.09
CUEDC1Q9NWM3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms